Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03237 ATGGAGGCGCAACCTCCAACACCATCCACTGCTCCGCCTCTATCCTCGGTGGCTCCGCCGCCACCACCCCACCTGAACTACCCCGATTCAGTTGACTCCTCCCCACGCTCCCGCAACACTGAATCATGGGACGAACCCTTCCCTCCGGCGTCCACAAAGCTCCGTCTTATGTGCAGTTACGGCGGACACATCGTCCCTCGTCCACACGACAAGTCTCTCTGCTACGTTGGCGGCGACACCCGAATCGTGGTGGTTGAACGCACCACCTCACTCTCCGAACTCTCCACGCGCCTCTCCAAAACCTTCCTTAATGGAAGATCCTTCACTCTCAAGTACCAGCTCCCAAACGAAGACCTTGATTCTCTTATCTCTGTTACCACCGACGAAGACCTCGAGAACATGATCGATGAGTACGATCGAACATCCGCCGCTAATTCCTCTATCAAACCCTCACGTATTCGCCTTTTTCTTTTCCCCACAAAACCCGATTCCGCTCAATCTATTCCTCCCCAGATTCTAGATACTTCTTCTGCTAAGTCTGATGATTGGTTCCTTGATGCCCTAAACGGCGCCGGATTGTTGAATCGTGGGTTTTCTGATTCTGCTTCTGTTAACTGTCTTCTGGGTCTTGATGATGATGTTGCTGGGAATGGAATTGAACCGGGTTCAAGAGAGGTTGTTGTGGAGGGTGCTTCACAAGGTGGATCTTTTGGGAATTGTAAGAATTTGAAGCAGGATGTTCATTCTGTTCCTGATTCGCCTATGTTGGAGACGACGTCGTCTTTTGGGTCTACTTCCTCGTCGCCGTCATTGGCTAATTTGCCGCCGATTAGGGTTCATGTGGAGGATCAGAAGGTGGTGGGGATTGAGGAGCAGTTTGCTCAAATGGGTTTTGGACAGAAGCAGGATGAGGGTTTTGTTGTGCAGCAACCGCCGCCGCCGCCGGTGCAGGCGACACTTTCTGCCGCGGCGGTGGGTGTTCCGATCGGGTCTTCGGCGGTGGTTGGAGGTGAATATCAGAACAGGGTTTTCTCCGATGATGAGAGATCGGATCATGGGGTGCCTGTTGGATATAGAAAACCACCAACTCCTCAGCCGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAACCACAGTCACAACCACAACCTCAATTTCAACAAAAGTCAAGTGGCAGCGTTGATTTGCCTTCCCCTGATTCAGTTTCAAGTGATAATAGTCTTACAAATGCAATTTCACGTCAAAAACCTGTAATCTATCAAGACCAAGTTCAGATTCAATCTGGAACTACAAGGGTTCCTAGCAACCAAGTGGATCCGAAACTTAATATGTCTGATCCACATGGTAGGATCCAGGTTCAGCAACATGTGCAGGACCCGGGATATTTGTTGCAACAACAATTTGATCACCAACAGCAGCATCAACAGCAGACTCAACAGCAGCATCAACAGCAGCATCAACAGCAGCCTCAACAGCAGACTCAACAGCAGCATCAACAGCAGCCTCAGCAGCAGCAGCAGCAGCAGTTTATACATGGCACACATTTCATTCACCATAACCCTGCAATTCCTGCTTATTATCCTGTATATCCTTCCCAGCAACAGACCCATCATCCTCAACATCCTCAGGTTTATTATGTGTCTGCAAGACAGGCCCAAGCTTACAACTTGTCTGTTCAGCAGGCTAATATGGGTGAATCTGCCACAACAATCCCTTCTAGCCGGCCCCAAACTCCGCCGAATCCTGCTTCATTGGTTCAACCTTCTGCAGCTTACAACCCCATGAGAAATGCTCCCCTACCTAAAACTGAAATGACTGCAGCTGCTTATAGAACTGCAACTGCAGGTAACCCTCACTTGGTTCAAGTTCCCACAACTCAGCATCAGCAACAATATGTCACTTACTCCCAGATCCATCATCCATCTCAGTCCATAGCTCCTACTTCTGCTCCTGCTAATTATGCTTATGATTATGTGGATCCTGCACATGCTCAAATATATTACTCTCAGCCTCTGGCCCCCACAATGCCTTCACAGTACCAGACCATGACAGCTGCTGCAATGGGGATGCCGGAAGTTTCTTCTGCTCAGCATCCCTCAGAGGGCATGAAGCAGCAGATAAGAACATCTCAGCCATTATAA 2148 0.4949 MEAQPPTPSTAPPLSSVAPPPPPHLNYPDSVDSSPRSRNTESWDEPFPPASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVERTTSLSELSTRLSKTFLNGRSFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTSAANSSIKPSRIRLFLFPTKPDSAQSIPPQILDTSSAKSDDWFLDALNGAGLLNRGFSDSASVNCLLGLDDDVAGNGIEPGSREVVVEGASQGGSFGNCKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVEDQKVVGIEEQFAQMGFGQKQDEGFVVQQPPPPPVQATLSAAAVGVPIGSSAVVGGEYQNRVFSDDERSDHGVPVGYRKPPTPQPQQQQQQQQQQQQQPQSQPQPQFQQKSSGSVDLPSPDSVSSDNSLTNAISRQKPVIYQDQVQIQSGTTRVPSNQVDPKLNMSDPHGRIQVQQHVQDPGYLLQQQFDHQQQHQQQTQQQHQQQHQQQPQQQTQQQHQQQPQQQQQQQFIHGTHFIHHNPAIPAYYPVYPSQQQTHHPQHPQVYYVSARQAQAYNLSVQQANMGESATTIPSSRPQTPPNPASLVQPSAAYNPMRNAPLPKTEMTAAAYRTATAGNPHLVQVPTTQHQQQYVTYSQIHHPSQSIAPTSAPANYAYDYVDPAHAQIYYSQPLAPTMPSQYQTMTAAAMGMPEVSSAQHPSEGMKQQIRTSQPL* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03237 715 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 73 160 - -
Rops6g03237 715 PANTHER OS05G0427100 PROTEIN-RELATED 26 386 - -
Rops6g03237 715 CDD PB1_UP2 57 158 - -
Rops6g03237 715 Pfam PB1 domain 69 159 IPR000270 GO:0005515
Rops6g03237 715 MobiDBLite consensus disorder prediction 344 410 - -
Rops6g03237 715 SMART PB1_new 68 160 IPR000270 GO:0005515
Rops6g03237 715 MobiDBLite consensus disorder prediction 30 46 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 428 449 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 700 715 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 694 715 - -
Rops6g03237 715 Gene3D - 73 158 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 363 410 - -
Rops6g03237 715 ProSiteProfiles PB1 domain profile. 53 160 IPR000270 GO:0005515
Rops6g03237 715 MobiDBLite consensus disorder prediction 1 48 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 1 28 - -
Rops6g03237 715 SUPERFAMILY CAD & PB1 domains 69 168 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 470 511 - -
Rops6g03237 715 MobiDBLite consensus disorder prediction 565 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03237 Rops-Chr6 56263048 56266045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03237 50 233 MAP Kinase Kinase Kinase AT1G79570 35.204 4.66e-26 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03237 6 56263048 56266045 Rops6g03237 6 56263048 56266045 ECH
Rops6g03237 6 56263048 56266045 Rops5g00292 5 4503139 4505691 ECH