Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03236 ATGGCGTGGAGGGGTTTGTTATCTTTTGGAAGATTATGGGCATCGTTTCAGGGAGGGACGAGACAGGTTGATCCTGCTGCTTATACTATCAAGTCCCATGGAGCCACACTTGCAAGAAACCACATGCTTGATTGGCTTATATTGGTGCTTCTCATAGTAATAGAGGTTGTCCTCTTTGTCATTCACCCATTTCACCGCTTTGTGGGAAGGGACATGATGGAAGATCTTAAATATCCTATGAAAGACAACAGTGTGCCTGTATGGGCTGTTCCTCTATATGCGGTTCTGTTGCCAATGGCTGTTTTCCTTTTCTTCTATATGCGCAGGAGAGATGTTTATGATTTGCACCACGGTGTTCTAGGCCTCCTATTTGCTGTTCTGATCACTGGGGTCTTGACCGATGCAATAAAAAATGCAGTTGGCCGGCCTCGGCCTGATTTCTTTTGGCGTTGCTTTCCCGATGGAGTTGAGGTTTATGATAAATGGGGAGGTGTAGTATGTCATGGCAAGGGTAGTGATATAAAAGAAGGACACAAGAGTTTCCCAAGCGGCCATACATCATGGTCCTTTGCTGGTCTAGGTTTTCTCTCTTTGTACCTATCCGGGAAGATTAAAGCTTTTGATCGCAGAGGGCACGTGGCAAAATTATGCATTGTGTTTCTTCCTCTACTTGTTGCTTGTCTAGTTGGAATCTCTCGAGTGGATGACTATTGGCACCATTGGCAAGATGTATTTGCTGGAGGCCTTCTAGGGCTTGTTGTAGCAACCTTTTGCTATATGCAGTTCTTCCCTGCTCCCTATAGTGATGATGGATGGGGTCCATATGCATATTTCAAGGCAATGGAGGAATCACAAGCCAATTCAAACATGAATCGGGAGTCACCCGCTGTACAACCCATGGGGGAACAGGTTATGACCCAAATACCAAGGAGAACTGGTGAGACAGTCATCCCTTTCACTTATAATAGCCCAACCTTGGAAGCCATGGAGCTGGGACAAAAGTGA 1005 0.4567 MAWRGLLSFGRLWASFQGGTRQVDPAAYTIKSHGATLARNHMLDWLILVLLIVIEVVLFVIHPFHRFVGRDMMEDLKYPMKDNSVPVWAVPLYAVLLPMAVFLFFYMRRRDVYDLHHGVLGLLFAVLITGVLTDAIKNAVGRPRPDFFWRCFPDGVEVYDKWGGVVCHGKGSDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDRRGHVAKLCIVFLPLLVACLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYMQFFPAPYSDDGWGPYAYFKAMEESQANSNMNRESPAVQPMGEQVMTQIPRRTGETVIPFTYNSPTLEAMELGQK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03236 334 PANTHER LIPID PHOSPHATE PHOSPHATASE 30 294 IPR043216 GO:0006644
Rops6g03236 334 SMART acid_phosph_2 117 259 IPR000326 -
Rops6g03236 334 FunFam Lipid phosphate phosphatase 2 39 270 - -
Rops6g03236 334 CDD PAP2_containing_1_like 76 262 - -
Rops6g03236 334 Pfam PAP2 superfamily 119 263 IPR000326 -
Rops6g03236 334 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 266 IPR036938 -
Rops6g03236 334 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 37 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03236 Rops-Chr6 56225071 56230032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03236 21 303 Lipid Metabolism Gene Families AT3G02600 67.944 4.91e-152 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03236 6 56225071 56230032 Rops6g03236 6 56225071 56230032 ECH