Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03233 ATGGGCTCTGGCCTCCCATCTTCACTTGATTCTGGCCACGCCCGTCTTCACCAGCTTGGTTACAAACAAGAGCTCAAACGTGATCTTTCGGTTATTTCAAATTTTGCGTTTTCGTTTTCTATTATATCAGTGCTCACTGGAGTCACCACCCTTTACAACACTGGCTTGAACTATGGTGGCCCTGTTTCATTCGTGTATGGCTGGTTTATGGCTTCTGTTTTCACCATGCTTGTTGCACTGTCAATGGCTGAAATTTGTTCATCTTATCCAACCTCTGGTGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCCAAATGGGCACCCTTTGCTTCCTGGATCACTGGCTGGTTCAATATTGTTGGTCAGTGGGCCGTGACAACAAGTGTGGATTTTTCACTTGCACAAATCATTCAGGTTATCATTCTCCTTAGCACTGGTGGGAAAAATGGTGGTGGATATGAAGCATCTAAATATGTAATTATTGCTTTCCATGGGGGAATTTTGCTCCTACATGGTATAATAAACAGCCTTCCTATCTCTTTGTTATCATTCTTAGGGCAGTTGGCTGCTATCTGGAATGTTTTAGGTGTACTTGTGCTTATGATTCTCATTCCATCTGTTGCAACGGAAACGGCTAGTGCCAAGTTTGTTTTCACTCATTTCAATACTGACAATGGGGAGGGAATCAACAGCAGACCCTACATATTTCTCTTGGGACTTCTAATGAGTCAGTATACCCTTACTGGGTATGATGCATCAGCTCATATGACAGAGGAAACCAAGGATGCTGATAGAAACGGACCAAAAGGAATCATCAGCGCTGTTGGGATATCTATTATTGTTGGATGGGGTTACATACTGGGCATTACCTTTGCTGTCACTGACATCCCTTACCTTTTGAGTGAAAATAATGATGCTGGTGGATATGCCATAGCTGAAATATTTTATCTTGCATTTAAGAGAAGATATGGGAATGGAGTTGGGGGTATTATTTGTTTGGCAATTGTTGCTGTTGCCATTTTCTTCTGTGGTATGAGTTCAGTTACCAGCAATTCAAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCACTATCATCATTGTGGCATAAAGTTAACAAACAGGAGGTCCCCATATATGCAGTTTGGCTCTCCGTTTTTATTTCATTTTGCATGGCCCTAACGTCTCTTGGAAGCATAGTGGCATTTGAGGCTATGGTGTCAGTAGCAACAATTGGCCTCTACATTGCTTATGCCCTACCTATCTTCTTTAGGGTGACCTTGGCACAAAAGCATTTTGTTCCAGGGCCTTTCAACTTGGGACGTTATGGAATCATTGTAGGGTGGGTTGCAGTTCTTTGGGTAGTGACCATATCCATCCTCTTCTCATTGCCTGTTTCATATCCAATAACCATTGAGACACTAAACTACACCCCAGTTGCTGTTGGATGTTTGCTCATTCTTGTTGTTTCTTACTGGATTATCAGTGGTCGACATTGGTTTAAAGGACCTATAACCAATATAGAACAGTGA 1539 0.4263 MGSGLPSSLDSGHARLHQLGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLNYGGPVSFVYGWFMASVFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPKWAPFASWITGWFNIVGQWAVTTSVDFSLAQIIQVIILLSTGGKNGGGYEASKYVIIAFHGGILLLHGIINSLPISLLSFLGQLAAIWNVLGVLVLMILIPSVATETASAKFVFTHFNTDNGEGINSRPYIFLLGLLMSQYTLTGYDASAHMTEETKDADRNGPKGIISAVGISIIVGWGYILGITFAVTDIPYLLSENNDAGGYAIAEIFYLAFKRRYGNGVGGIICLAIVAVAIFFCGMSSVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPIYAVWLSVFISFCMALTSLGSIVAFEAMVSVATIGLYIAYALPIFFRVTLAQKHFVPGPFNLGRYGIIVGWVAVLWVVTISILFSLPVSYPITIETLNYTPVAVGCLLILVVSYWIISGRHWFKGPITNIEQ* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03233 512 PANTHER AMINO-ACID PERMEASE BAT1 10 511 - -
Rops6g03233 512 FunFam Amino-acid permease BAT1 23 502 - -
Rops6g03233 512 Pfam Amino acid permease 29 484 IPR002293 GO:0016020|GO:0022857|GO:0055085
Rops6g03233 512 NCBIfam amino acid permease 16 506 IPR004756 GO:0006865|GO:0016020
Rops6g03233 512 ProSitePatterns Amino acid permeases signature. 59 90 IPR004840 GO:0006865|GO:0016020|GO:0055085
Rops6g03233 512 Gene3D Amino acid/polyamine transporter I 23 504 - -
Rops6g03233 512 PIRSF AA_transporter 15 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03233 Rops-Chr6 56180722 56191589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03233 76 510 Organic Solute Cotransporters AT2G01170 78.851 0.0 677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03233 6 56180722 56191589 Rops6g03233 6 56180722 56191589 ECH