Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03229 ATGGAGAAAGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTACTGTATGGCCGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTGGCAAATGCATTGTCGGGCCGGCACCTCCGGACCCTTGTGTGTAACTCATGTAGATATCATCCTGCTTATGTTCAGTGTTTGGACCACAAAATGTTAATCTGTCGAGAGTGTGATCAAAAGCTGCACAACAGTTCTTTACCACATCGCAGACGAGCTATCAGAACTTTCATGGGTTGCCCTTCTGCCAAAGACTTTGCAAAACTCTGGGGTTTTGAATTGAATGAGATTGAAAACAGTGTCAATCAGGATCAGCTTGCATCCATATCTAGTGTTTCTGCAGATTCCAATGTGGTACTAGTCTCAGGGAAGCGTGGCATTCAAACTGGGGTCCCTTCAAAAGTATCTAGGGCCAAACTTGATGGGGGATTGAGCAGTCAACAAAGTCAGATATTCTACTGTGACCAAGAGCGACAAACTATTCTGCAGCAGATTGTTGATTTAAAACGTTTTCAGCTGAATGAGGAGAGTGATCATTCTACAAAGATAAATGGGCTACGAGAGGAAGACTTATCTCCTTCAGTATATCATACTCTTACAAAATTGGATGAAAATTTCAACCAGCAAGCACAAAATTCCCAGGATCTTGCTACTGATCTTCTGGAAAAAGACAGTCCCATTGCAGAGCTGAATCCTGAAACTTTCTCTTCTGCATTTTCTCAACTTGATAATTTGTCTTCATCTTCATCTTCAGTTATAGATGTTCCCTTGCACGGAGAGTTGTTCTGGACATGCAAAAGTCCGCTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGTGAAGAAATTATGTGTCAAGATGATTTTAACATACCTGATGTTGACTTGACATTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAAATAGAGTGATGCTTGATGATAATGATGTCTCCTGCTATTCTTTAGAGAATGATATGTCAGTTGATAAGTCAGATATTGAGAATCCAAATGCAATGGAGGCATCAAAAGCAATTTCGACTTTTATCCAGGAAACCTGGAGCTAA 1131 0.4058 MEKVCEFCTALRPLVYCMADAAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHPAYVQCLDHKMLICRECDQKLHNSSLPHRRRAIRTFMGCPSAKDFAKLWGFELNEIENSVNQDQLASISSVSADSNVVLVSGKRGIQTGVPSKVSRAKLDGGLSSQQSQIFYCDQERQTILQQIVDLKRFQLNEESDHSTKINGLREEDLSPSVYHTLTKLDENFNQQAQNSQDLATDLLEKDSPIAELNPETFSSAFSQLDNLSSSSSSVIDVPLHGELFWTCKSPLQSNQLWSQNIQDLGICEEIMCQDDFNIPDVDLTFQNFEELFGGDQDPNRVMLDDNDVSCYSLENDMSVDKSDIENPNAMEASKAISTFIQETWS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03229 376 CDD Bbox1_BBX-like 4 47 - -
Rops6g03229 376 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 320 - -
Rops6g03229 376 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Rops6g03229 376 SMART bboxneu5 48 87 IPR000315 GO:0008270
Rops6g03229 376 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03229 1 358 C2C2-CO-like Transcription Factor Family AT1G68190 39.560 1.04e-73 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03229 6 56141999 56152896 Rops6g03229 6 56141999 56152896 ECH