Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03223 ATGGCGTGTGCAAAGCTCAACTCTTTGTCTTCCCAGTGGATCGCTAACAACTCTTTCTCTCCTCGCCGTGGATCTTCCTCTCTCTCCGCCACTCGCCGAGTCTCTCTTCCGATCCGGGCATCTTCTTATTCCGATGAACTCGTCCAAACCGCTAAATCTATTGCATCTCCTGGTCGTGGAATTCTTGCAATTGATGAGTCAAATGCAACCTGTGGGAAGCGTTTGGCATCCATTGGATTGGACAATACTGAGGTCAATCGCCAGGCCTATAGGCAACTTCTGCTGACCACACCTGGCCTTGGTGAATACATTTCTGGTGCCATTCTTTTCGAAGAAACCCTTTACCAATCAACAACAGATGGAAAGAAGTTTGTGGATTGCCTCTGTGAGGAAAACATTGTACCCGGCATCAAAGTTGATAAGGGTTTGGTCCCTCTTCCGGGTTCTAACAATGAATCTTGGTGCCAAGGGTTAGATGGATTGGCTTCTAGATCTGCTGAGTACTACAAGCAAGGCGCTCGATTTGCCAAATGGAGGACAGTTGTTAGCATTCCTTGTGGTCCTTCTGCATTAGCTGTGAAGGAAGCAGCATGGGGACTTGCACGTTATGCTGCTATCTCTCAGGACAATGGTCTTGTTCCAATTGTAGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAGAGGACACTGGAAGTGGCGGAGAAGGTCTGGGCTGAAGTCTTCTTCTATTTGGCTGAAAACAACGTCATTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCTGAACACAAGCAAAAGGCTTCTCCAGAAACCATTGCCAAATACACACTAACCATGCTTAGAAGAAGAGTTCCTCCTGCAGTTCCTGGAATCATGTTTTTGTCGGGTGGACAATCTGAAGTGCAAGCCACACTAAATCTTAATGCTATGAACCAAAGTCCCAACCCATGGCATGTTTCTTTCTCCTATGCACGAGCTCTGCAAAACACCGTGCTTAAGACCTGGCAAGGACGCCCTGAGAATGTGGAAGCTGCTCAGAAGGCTCTTTTGGTGCGTGCTAAAGCAAACTCCTTGGCTCAACTAGGAAGATACTCTGCTGAGGGTGAAAGTGAAGAAGCCAAGAAGGGAATGTTTGTCAAGGGCTATACCTACTAA 1173 0.4723 MACAKLNSLSSQWIANNSFSPRRGSSSLSATRRVSLPIRASSYSDELVQTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLCEENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWAEVFFYLAENNVIFEGILLKPSMVTPGAEHKQKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVQATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKALLVRAKANSLAQLGRYSAEGESEEAKKGMFVKGYTY* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03223 390 Gene3D Aldolase class I 27 389 IPR013785 -
Rops6g03223 390 SUPERFAMILY Aldolase 37 390 - -
Rops6g03223 390 Pfam Fructose-bisphosphate aldolase class-I 46 390 IPR000741 GO:0004332|GO:0006096
Rops6g03223 390 CDD FBP_aldolase_I_a 44 370 - -
Rops6g03223 390 FunFam Fructose-bisphosphate aldolase 29 389 - -
Rops6g03223 390 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 251 261 IPR029768 -
Rops6g03223 390 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 41 390 IPR000741 GO:0004332|GO:0006096
Rops6g03223 390 NCBIfam fructose-bisphosphate aldolase class I 46 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03223 Rops-Chr6 56027321 56030347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03223 41 390 Miscellaneous Gene Families AT3G52930 55.650 9.76e-134 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03223 6 56027321 56030347 Rops6g03223 6 56027321 56030347 ECH