Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03216 ATGGGATTGGTAACCACCACCACTGTTCCTATGAACCTCGTTCCTCAATTCGGGTCGCTCCGAAACCACCTCACCTCCATTCGGGTCAACAACTCCTTCCCTCTATCACGAAGGAGGAATAGGAGGAGTTTTGGTAAATTTGTTTGCTTCGCTGTTGATGACGACCTCAGACAGAAGCAACAAAAGTCGAGTACTAGCACAAGTGGGTTTGGCTCCGCCGTTGAAGAAAGGCCTGATGAAAATACAGATCTGCTTGATAGAACAACTGAAGAAACACTGGAAAATTTTAACCAAGATGGTGACAGAGGTGCTATCTATGATTTCCTTTATCCTAGTAAAGAGCTTCTTCCAGATGATAAAGAAATGACCATATTTGATCATCTTGAAGAGCTGCGGCAGAGGATCTTTGTATCGGTTCTGGCAGTTGGAGCAAGCATTTTGGGATGCTTTGCGTTTTCAAAAGAACTGATAATGGTTCTTGAAGCTCCAGTTAAATCAGAGGGTGTAAGATTTCTTCAGCTGGCTCCTGGCGAATTTTTCTTCACAACTTTGAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCCATCATCCTCTATGAAATCATAGCCTTTGTACTTCCAGGTCTAACAAAAGCTGAAAGAAGGTTTCTAGGGCCAATTGTTTTAGGCTCATCGGTTCTTTTTTATGCCGGGATAACCTTCTCCTACTTGGTTCTGACACCTGCAGCATTAAATTTCTTTGTTAATTACGCTGAAGGAGCCGTTGAATCATTGTGGTCCATTGATCAATACTTTGAATTTGTTCTGGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTACCTGTTATACAATTTCTATTGGGACAAGTTGGATTGGTGTCTGGAGACCAGATGCTATCAGTTTGGAGGTATGTTGTGGTTGGCGCAGTGGTGGCAGCCGCTGTAGTTACGCCATCCACTGATCCTCTCACTCAAATTCTTCTAGCGGCACCTTTATTGGGTCTTTACCTAGGTGGCGCATGGATGGTCAAGCTCACAGGAAAGTGA 1056 0.4422 MGLVTTTTVPMNLVPQFGSLRNHLTSIRVNNSFPLSRRRNRRSFGKFVCFAVDDDLRQKQQKSSTSTSGFGSAVEERPDENTDLLDRTTEETLENFNQDGDRGAIYDFLYPSKELLPDDKEMTIFDHLEELRQRIFVSVLAVGASILGCFAFSKELIMVLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQVGLVSGDQMLSVWRYVVVGAVVAAAVVTPSTDPLTQILLAAPLLGLYLGGAWMVKLTGK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03216 351 PRINTS Bacterial Sec-independent translocation TatC protein family signature 215 241 IPR002033 GO:0016020
Rops6g03216 351 PRINTS Bacterial Sec-independent translocation TatC protein family signature 266 294 IPR002033 GO:0016020
Rops6g03216 351 PRINTS Bacterial Sec-independent translocation TatC protein family signature 197 215 IPR002033 GO:0016020
Rops6g03216 351 PRINTS Bacterial Sec-independent translocation TatC protein family signature 123 150 IPR002033 GO:0016020
Rops6g03216 351 MobiDBLite consensus disorder prediction 60 84 - -
Rops6g03216 351 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 105 351 IPR002033 GO:0016020
Rops6g03216 351 Hamap Sec-independent protein translocase protein TatC [tatC]. 119 351 IPR002033 GO:0016020
Rops6g03216 351 Pfam Sec-independent protein translocase protein (TatC) 126 334 IPR002033 GO:0016020
Rops6g03216 351 ProSitePatterns TatC family signature. 266 285 IPR019820 -
Rops6g03216 351 NCBIfam twin-arginine translocase subunit TatC 124 339 IPR002033 GO:0016020
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03216 6 55946029 55949445 Rops6g03216 6 55946029 55949445 ECH