Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03191 ATGGCCGCGTCGTCGTCGTCCTCCGCCGCGGGCAGCACCAACATCATGCTAGCCATCTTCGAGAAGAAAACCAACACGGTAGATCTCTATCGACCTCTCCGCAACTACATAGCCTTCCACTACTCCGAACGTGAGGCACAGAATCTCGAAGACGATCTCCAAACCCTAAAGCAACTCCGTTCCGACGTGGAACGCCACTCCGATCCATCACTCCCGACCCGACGCGACCTCCTCCAAACCTACTTCAAAGCCCTATGCCAGGTGGAAACACGTTTCCCCATCTCACCCGACCCGGACCATGTCAACACCCTAACCTTCGTTTGGTTCGATGCATTCAAACCTAAACAGAAGGCTTCTCAACAGAATATCCATCTCGAGAAGGCCTCGGTTCTCTTCAGTTTGAGCGCCGTTTACAGTCAGATTGGTTTGTCCTACGACCGCAACACCGTCGATGGCCGACGTCAGGCGTCGCATGCTTTCATCGCCGCCGCAGGTTCCTTTGCTTTCCTTAGGGATAATGCCTCCATGAAAGCCTCCATCGGAAATTCCACCACCGTTGATTTGTCTATCGAGTGCGCCGGAATGTTGGAGAAGCTCATGCTCGCTCAGGCTCAGGAATGCGTCTTTGAAAACACCATTGCTAAAGGAAGCACTCCCGTTGTTTGTGCCAAGATCTCTAGGCAGGTTGGACTGTATTATGAGGAAGCTTTGGCTGCACTGAACGTGGCCCCGTTAAGCCAGCATTTTGATAAGTCATGGATAGTTCATGTGCAGTTGAAGGCAGCTTTGTTCTATGCAGAAGCTTGTTATAGGTATGGATTAGAGCTACATGACAAAGAAGAAATAGCGGAGGAGATTGCGCGACTGAAGAGTGGTGTTAATGTGCTAACTGAGGCAAAGAAAAGCTCAAAGGGTGCTGCTGCTCAGATTCTAGATGCAATTAGCAAGTTAGAGGCCAATATTAACCGAAATTTAGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCTCCAAGTACGTTACCACCCCTTCCGGCATTTTCTATGGTGAAGCCGATGGTGATGAATGAGGTGCTAGATGCAAGCAAAGAGAAGATGTTTGCAAGTCTTGTTCCTGACAGCAGTGCAAAGGCACTCTCCAGGTACACTGAAATGGTGGATGACGTTATAAGAACACAGGCTGAAAAGTTGCAGCAAGCTAGTGAGCTGACTCGAGTTAGGCTTAAGGAAATGGAACTGCCAGATTCTATTCTTGCTTTGGAAGGAAATTTTACTTTGCCAACAAATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAGGACCTAAGGAGGGTGAATCAAGAATTTCTGCTCCAGACTGAGGAGTTGTTGCAAAAGGAAGCAAGAGAAGATGCTCAATTTAGAAGCCAATTTGGCACAAAATGGACTAGGCCTCAATCAAGCACTTTGACAAAGAACTTGCAGGATAGGCTAAACAGGTTTGCAGGCAACTTGAAGCAAGCTGCTGAAAGTGATGCCAGGATTGAGCGATCAGTTAGAGAACATTCAGCACTCATGTCAATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCAAGCTTGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTGTTGTGGGGTCTCTCAAGCAGAGCTTGAGGCAACTAGAAACACTAGGAGCTCAAAGAGCCGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCCAAGTTGATGACATCCACCGGTTCTTATGAGGATCTTTTCAAGAAGGAGATAGCAAAATATGATCATATTTGTGAAGAAATAGCTCAAAATATTGAGGCACAAGAGCAATTGTTGCTGCAGATCCAGGCTCAAAATGATGATTTTTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGGGAAAAAGCCTACAAGCAGATTGAAGCTGCCATAGCAAAGTTTCGAGAAATAAAGGACAATATCAATGAAGGGTTAAAATTCTATGTTACTCTGCAGGATGCAATCACCAATGTAAAGCAGCAAAGCAATGACTTTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTTCAAAGACAAGTGGCCGGTCTGAGTTTCCAGGATAACAAAAATACAGGTTCCTTTAACAACTACCCTTCAGTGGGAAACCAAAACCAAAGATCCAATACACAAACAGATCCTCGTCCACAAACACCTTATTATCAGCCATCTGAGCAGCCACCAGTTCCTTCCTATGTTCATCCCCCTCCCCCATATGGTCCTCCTGCACATCATCAGCCTCCACCTCCATACCAAATTCCACCATCATCAGCTGCCCCGTACCCACCCCATCAGGTCCATCAACAACCACCGGCAAGCCATGAGTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCATACTACAATGCTCACGCACCACAACCTGCTTCTGTCCCTCGGCCTCCTTATACCATTCCATCTCCATATCCTCCACCTCACCAAAGTGGCTACTATAAGCAGCAATAG 2610 0.467 MAASSSSSAAGSTNIMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDVERHSDPSLPTRRDLLQTYFKALCQVETRFPISPDPDHVNTLTFVWFDAFKPKQKASQQNIHLEKASVLFSLSAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASIGNSTTVDLSIECAGMLEKLMLAQAQECVFENTIAKGSTPVVCAKISRQVGLYYEEALAALNVAPLSQHFDKSWIVHVQLKAALFYAEACYRYGLELHDKEEIAEEIARLKSGVNVLTEAKKSSKGAAAQILDAISKLEANINRNLERAVKENDRVYLMRVPSPSTLPPLPAFSMVKPMVMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQEFLLQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAVVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHICEEIAQNIEAQEQLLLQIQAQNDDFSVIFNLEDYKASREKAYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDNKNTGSFNNYPSVGNQNQRSNTQTDPRPQTPYYQPSEQPPVPSYVHPPPPYGPPAHHQPPPPYQIPPSSAAPYPPHQVHQQPPASHEYGQPAYPGWRGPYYNAHAPQPASVPRPPYTIPSPYPPPHQSGYYKQQ* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03191 869 MobiDBLite consensus disorder prediction 767 814 - -
Rops6g03191 869 Pfam BRO1-like domain 16 394 IPR004328 -
Rops6g03191 869 ProSiteProfiles BRO1 domain profile. 14 409 IPR004328 -
Rops6g03191 869 SMART BRO1_2 15 399 IPR004328 -
Rops6g03191 869 Pfam ALIX V-shaped domain binding to HIV 431 715 IPR025304 GO:0005515
Rops6g03191 869 MobiDBLite consensus disorder prediction 734 869 - -
Rops6g03191 869 CDD BRO1_Alix_like_1 16 371 - -
Rops6g03191 869 CDD V_Alix_like_1 377 713 - -
Rops6g03191 869 Coils Coil 39 66 - -
Rops6g03191 869 Gene3D alix/aip1 like domains 423 704 - -
Rops6g03191 869 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
Rops6g03191 869 Coils Coil 657 684 - -
Rops6g03191 869 Coils Coil 578 598 - -
Rops6g03191 869 PANTHER PCD6 INTERACTING PROTEIN-RELATED 15 868 - -
Rops6g03191 869 Coils Coil 627 647 - -
Rops6g03191 869 Gene3D alix/aip1 like domains 12 376 IPR038499 -
Rops6g03191 869 MobiDBLite consensus disorder prediction 843 861 - -
Rops6g03191 869 MobiDBLite consensus disorder prediction 734 766 - -
Rops6g03191 869 Coils Coil 451 478 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03191 6 55598775 55609767 Rops6g03191 6 55598775 55609767 ECH