Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03186 ATGAGTAACCCAGATGAAGAAGAACCATTATCCAAAGCTGAAATAGCAGCTCAACATCTTTACCATCTTCGGGACACTTATTTCCCACCCAACCCAAATGACAGAATCTCAACGTTGCAACACGAATCCGATCTCGCTCTCAAACTTCTTGATTCCATTCCCCCAGAACAAAGAAAATCACCTATGCAACGTGCAACATTTGAATATCTTAGAGGGAAGGTGTTGGATGTATTTCCTGACTACAGGAAAGATGCTGAGGATCATCTTTCCAAAGCTGTTAAATTGAACCCATCTCTTGCAGATGCTTGGCTATGTCTAGGTAACTGCATTTGGAAGAAAGGAGACTTATCTGCTGCAAAGAACTGCCTCAGTCTTGCATTAAGCAAGGGTCCTAACAAAAATATTCTTTGTCAATTATCAATGCTTAAAAGAAAAATGTCTCAAGGTGCAGAGAATCAGACAGAACTTGTTGATGAAAGCATTCAACATGCCAAGGAAGCAATTACTTTGGACGTCATGGATGGGAACTCTTGGTATAATCTTGGAAATGCATACCTTACAAGTTTTTTTGTCACTGGAGGTTGGGATCATACCAGACTTTCACATTCTTTAAAAGCATATCAAAATGCTGAGAAAGATGAAAGAATGAAGTCCAATCCAGATCTATATTTTAACAGTGCCACTGTTAACAAATATCTAGAGAACTACCAGAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTAAAGGATCCAGGTCTCAATGCTGCAGAGGAGGTTCAGAAGATAGTCAATTTACTTGACAGGGTGGACAATCTTTTGAGGGGACATGTAAGAGCTAAGCGAATGGCATCTTTGGTATCATCATTGCCTGCTGCTAATTTGAAATTGTCACACAAAAGAGTTACCATAGACCTTCTGTCGGAGGGTCTGAATAGAGCTATGGCAGTAGAGGGGAAGGTGCTTTTCTTTGTCAGGAGTGAAAGTGTTGCTCCCCTATATTATTTGCTCTGTGATTCAAATCAAACTTGCTTTGTTCTTTCAGTTTATGGAATACGTAATGATGCGATCAAAGAAGGAGATCAGCTAACATTGCTTGACCCTTTTTTTCGTGAAGTTGATTTGTCCTGGAAGAAGCATTACCAGTTCAAATCTGTACGCGTGGATTTCTATGAACAAGTGATTGTAAATGGAAAAGCTCTGACTCCTCAACATGCTGTCCACACGTCCATATATGCACAACATAAAGCCTGA 1251 0.4037 MSNPDEEEPLSKAEIAAQHLYHLRDTYFPPNPNDRISTLQHESDLALKLLDSIPPEQRKSPMQRATFEYLRGKVLDVFPDYRKDAEDHLSKAVKLNPSLADAWLCLGNCIWKKGDLSAAKNCLSLALSKGPNKNILCQLSMLKRKMSQGAENQTELVDESIQHAKEAITLDVMDGNSWYNLGNAYLTSFFVTGGWDHTRLSHSLKAYQNAEKDERMKSNPDLYFNSATVNKYLENYQRALSGFEAAALKDPGLNAAEEVQKIVNLLDRVDNLLRGHVRAKRMASLVSSLPAANLKLSHKRVTIDLLSEGLNRAMAVEGKVLFFVRSESVAPLYYLLCDSNQTCFVLSVYGIRNDAIKEGDQLTLLDPFFREVDLSWKKHYQFKSVRVDFYEQVIVNGKALTPQHAVHTSIYAQHKA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03186 416 SMART tpr_5 100 133 IPR019734 GO:0005515
Rops6g03186 416 SMART tpr_5 220 253 IPR019734 GO:0005515
Rops6g03186 416 Gene3D - 277 416 IPR038645 -
Rops6g03186 416 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 41 392 - -
Rops6g03186 416 SUPERFAMILY TPR-like 70 244 IPR011990 GO:0005515
Rops6g03186 416 Gene3D Tetratricopeptide repeat domain 3 276 IPR011990 GO:0005515
Rops6g03186 416 Pfam Tetratricopeptide repeat protein 5 OB fold domain 298 407 IPR032076 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03186 6 55544513 55552981 Rops6g03186 6 55544513 55552981 ECH