Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03181 ATGTCTGGAACAAATTTATATCTGGGTCTTTTCCTGTGCATGCTTTTTGTATGCTGCTTTGCGACTTCACCTTCTTCCTTAGGGTCTCGTCGTTCGATCCTTCGAGAGGTCAACGACAATGGTAAAAACGATGGTGATCATCCTGATTATGCCGTTGAGCTTAATGCCACCAATTTCGATGCTGTTCTCAAGGATACCCCTGCTACCTTCGCCGTTGTTGAATTCTTTGCCCATTGGTGCCCTGCTTGCAGGAATTATAAGCCTCACTACGAAAAGGTTGCAAGGTTATTTAATGGACCTGATGCAGTGCATCCGGGAATCATATTAATGACAAGGGTAGATTGTGCATCAAAGATAAATACTAAGCTCTGTGATAAGTTTTCTGTTGGCCATTATCCTATGCTCTTTTGGGGCCCTCCTCCTAAATTTGTTGGAGGTGATTGGGAACCTAAACAAGAGAAAAATGATATACGGTTGATTGATGATGCACGCACAGCTGATCGGTTACTTAATTGGATCAACAAGCAAATAGGCAGTTCATTTGGCCTGGATGATCAGAAGTTTCAAAACGAGCATCTTTCATCTAATATATCAGACCCTGGACAGATTGCAAGAGCTATCTATGATGTTGAAGAGGCAACTGCTACGGCTTTTGACATCATCTTAGAGCACAAGATGATAAAACCAGAAACTCGTGCTTCACTTATAAAATTTCTTCAGCTTTTGGCAACTCATCATCCTTCTAGGAGATGCCGAAAGGGTTCTGCTGAATTACTTGTGAGCTTTGATGACTTGTACCCAATAGATTATTGGTCAACTAATAAGCAGGAAGATGATAAGAAGTCAGTTAGGAATTTACAGATATGTGGAAAAGACGTGCCACGCGGATACTGGATGTTCTGCCGTGGCAGTAAGAATGATACCAGAGGCTTTAGCTGTGGCTTATGGGTTCTTTTCCACTCACTCTCTGTGAAGATTGATGATGGGGAGAGTCAATTCACATTTAATGCAATATGCAATTTTGTTCACAACTTCTTCATTTGTGAGGAATGTCGACAACATTTTTACAAGATGTGTTCAAGTGTTTCTAGTCCATTCAACAAAACCCGTGACTTTGCTCTCTGGTTGTGGAGTTCCCATAATAAGGTAAACGAAAGGTTGATGCAAGAAGAAGCATCTCTAGGTACCGGTGATCCCAAATTCCCAAAGACAATTTGGCCTCCAAAGCAGCTTTGCTCTTCCTGTTACCTGGGCCATGACCAGAGGAGCAACAAAATTGAGTGGGACCAGGATGAGGTCTTCAAGGTTCTGACTACTTATTATGGAAAAACACTTGCTTCTCTCTACAAGGACAAGGGTATTGTTGTATATGATGGAACTGAAGGAGCTGTTGAAGATTTAATAGTTGCAACCAATGCAATTGTGGTGCCTGTGGGAGCTGCTTTGGCAATTGCTGTTGCTAGCTGTGCTTTTGGAGCACTTGCTTGCTACTGGCGTTCACAGCAAAAGAGTCGGAAGCCAAGGAGAACGTGGAAGTAG 1539 0.425 MSGTNLYLGLFLCMLFVCCFATSPSSLGSRRSILREVNDNGKNDGDHPDYAVELNATNFDAVLKDTPATFAVVEFFAHWCPACRNYKPHYEKVARLFNGPDAVHPGIILMTRVDCASKINTKLCDKFSVGHYPMLFWGPPPKFVGGDWEPKQEKNDIRLIDDARTADRLLNWINKQIGSSFGLDDQKFQNEHLSSNISDPGQIARAIYDVEEATATAFDIILEHKMIKPETRASLIKFLQLLATHHPSRRCRKGSAELLVSFDDLYPIDYWSTNKQEDDKKSVRNLQICGKDVPRGYWMFCRGSKNDTRGFSCGLWVLFHSLSVKIDDGESQFTFNAICNFVHNFFICEECRQHFYKMCSSVSSPFNKTRDFALWLWSSHNKVNERLMQEEASLGTGDPKFPKTIWPPKQLCSSCYLGHDQRSNKIEWDQDEVFKVLTTYYGKTLASLYKDKGIVVYDGTEGAVEDLIVATNAIVVPVGAALAIAVASCAFGALACYWRSQQKSRKPRRTWK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03181 512 FunFam Sulfhydryl oxidase 299 450 - -
Rops6g03181 512 Gene3D Glutaredoxin 37 198 - -
Rops6g03181 512 Pfam Thioredoxin 52 136 IPR013766 -
Rops6g03181 512 Gene3D ERV/ALR sulfhydryl oxidase domain 299 449 IPR036774 GO:0016972
Rops6g03181 512 SUPERFAMILY Thioredoxin-like 51 178 IPR036249 -
Rops6g03181 512 FunFam Sulfhydryl oxidase 35 206 - -
Rops6g03181 512 SUPERFAMILY FAD-dependent thiol oxidase 305 409 IPR036774 GO:0016972
Rops6g03181 512 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 304 406 IPR017905 GO:0016972
Rops6g03181 512 ProSitePatterns Thioredoxin family active site. 72 90 IPR017937 -
Rops6g03181 512 Pfam Erv1 / Alr family 313 407 IPR017905 GO:0016972
Rops6g03181 512 ProSiteProfiles Thioredoxin domain profile. 41 178 IPR013766 -
Rops6g03181 512 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 206 506 IPR039798 GO:0016971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03181 6 55423468 55436922 Rops6g03181 6 55423468 55436922 ECH