Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03175 ATGGCTATTCCCTACCCCCATTTCATTGCTTCTGAGAAAGCAGCCATTGAAGCCGGCCTTTTAGTACCTTCTTCTCCATCTTCTTCCATGTCTCAACCCTCTGTGATTCTCACCCAAGATGATTTAAAGAAAATCGCGGCTTATAAGGCCGTGGAATATGTTGAATCCGGCATGGTTCTTGGCCTTGGAACAGGGTCAACGGCGAAGCACGCTGTTGACCGAATCGGAGAGCTTCTTCGTCAGGGGAAGCTTAAGGACATTACAGGAATACCCACTTCGAAGAAGACACATGAACAGGCTTTGTCTTTGGGGATTCCCTTGTCGGATCTCGATTCGCACCCTGTTGTTGATCTTGCCATTGATGGTGCTGATGAGGTTGATCCTTATTTGAACTTGGTGAAGGGTCGTGGTGGGTCCCTCTTGAGAGAGAAAATGGTGGAGGGTGCTTGCAAGAAGTTTGTGGTGATTGTGGATGAGTCAAAATTGGTGAACTATTTGGGAGGTAGTGGTTTGGCTATGCCTGTTGAGGTTATTCGGTTTTGTTGGAAGTTCACTGCTGCTAAGTTGCAAAAGCTGTTTGAGGAGTCTGGTTGTGTTGCCAAGCTCAGGACTTTTGGTGAAAAGGAGGAACCTTATATCACAGATAATGGGAACTATATTGTGGATTTGTATTTTAAGGAGAGTATTGGTGATTTGAAGGCTGCAAGTGATGCAATTCTCCAGCTTGCGGGTGTTGTGGAGCATGGAATGTTCCTGGACATGGCCACCACTGTTATTGTTGCAGGTGAACTTGGGCTAACTGTGAAGAATAAGTAG 816 0.4608 MAIPYPHFIASEKAAIEAGLLVPSSPSSSMSQPSVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDITGIPTSKKTHEQALSLGIPLSDLDSHPVVDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNYLGGSGLAMPVEVIRFCWKFTAAKLQKLFEESGCVAKLRTFGEKEEPYITDNGNYIVDLYFKESIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNK* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03175 271 FunFam Ribose-5-phosphate isomerase A 42 176 - -
Rops6g03175 271 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 171 252 - -
Rops6g03175 271 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 27 270 - -
Rops6g03175 271 NCBIfam ribose 5-phosphate isomerase A 42 265 IPR004788 GO:0004751|GO:0009052
Rops6g03175 271 SUPERFAMILY NagB/RpiA/CoA transferase-like 38 222 IPR037171 -
Rops6g03175 271 Gene3D - 42 263 - -
Rops6g03175 271 Gene3D - 165 249 - -
Rops6g03175 271 CDD RPI_A 42 262 IPR004788 GO:0004751|GO:0009052
Rops6g03175 271 Hamap Ribose-5-phosphate isomerase A [rpiA]. 39 269 IPR020672 GO:0004751|GO:0009052
Rops6g03175 271 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 89 263 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03175 Rops-Chr6 55384886 55386344 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03175 6 55384886 55386344 Rops6g03175 6 55384886 55386344 ECH