Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03169 ATGGGAGCTGAGAAGAAATGGCTTTTCACGCTATTCAGTGCAGCACTCGTATCCCTCATGCTTCTTTTGATGTCTTCTTTCTCTGCTTTCAGCTCTCCAAAGACATTTCCCTCTCTTGTTCAACATGGTTCTCACTACCCTCCTGCTTTTGCATACTTCATCTCTGGTGGAAACAAAGATAAGGATCGGATCTTGCGTTTGTTGTTGGCAATCTATCATCCAAGGAATCGGTACCTTCTTCATCTTGGGATGGATGCTAGGGATGAAGAGAGGAGAGAGTTGGCCGCCGCCGTTAGGTTGGTGCCGGCGATTCGGGCTTTTGGGAATGTCGATGTGGTCGGAAAGGCTGATTGGGTCACATACTTGGGGTCATCCAATGTTGCCATCACTCTCCGTGCTGCAGCGATTATGATGAAATTGGATAGTGGGTGGAATTGGTTTATCACTTTGAATGCACGGGATTATCCTCTCATCACTCAGGATGATCTGTCTCACGTTTTCTCGTCCGTAAGGAGAGACCTCAATTTTATTGATCACACTGGTGACCTTGGATGGAAAGAGGGCGATAGATTCCAGCCTATTGTAGTTGACCCAGGGCTATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAGAAGAGGCCAACACCTGATGCATTCAAACTCTTCACAGGTTCACCATGGGTTATCTTGAGCCGACCATTTCTGGAGTACTGCATTTTTGGTTGGGATAATTTACCACGAACACTACTCATGTATTTTACGAATGTGAAGTTATCTCAAGAAGGGTACTTTCACTCAGTGGTTTGCAATGCACCAGAATTTAAGAACACAACAGTAAATGGTGACTTACGATATATGATCTGGGACAATCCTCCGAAGATGGAACCGCACTTTCTTAATGCCTCTGTTTATGATCTGATGGCAGAAAGTGGAGCTGCTTTTGCAAGACAGTTTGAAGTTAATAACCCTGTGCTGGACATGATTGATGAAAAGATCCTTCAACGCGGTCGCAATCGAGCTGCCCCAGGTGCATGGTGCTCTGGGCGGAGAAGCTGGTGGATGGATCCATGCTCCCAGTGGGGTGATGTCAATCTTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAAGAGTCTGTTTCTAACCTTCTTGATGACTGGAACTCACAAACCAATCAGTGCCAGTGA 1191 0.4584 MGAEKKWLFTLFSAALVSLMLLLMSSFSAFSSPKTFPSLVQHGSHYPPAFAYFISGGNKDKDRILRLLLAIYHPRNRYLLHLGMDARDEERRELAAAVRLVPAIRAFGNVDVVGKADWVTYLGSSNVAITLRAAAIMMKLDSGWNWFITLNARDYPLITQDDLSHVFSSVRRDLNFIDHTGDLGWKEGDRFQPIVVDPGLYLARRSQIFQATEKRPTPDAFKLFTGSPWVILSRPFLEYCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVVCNAPEFKNTTVNGDLRYMIWDNPPKMEPHFLNASVYDLMAESGAAFARQFEVNNPVLDMIDEKILQRGRNRAAPGAWCSGRRSWWMDPCSQWGDVNLLKPGPQAKKLEESVSNLLDDWNSQTNQCQ* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03169 396 PANTHER GLYCOSYLTRANSFERASE 4 395 IPR044610 GO:0015020
Rops6g03169 396 Pfam Core-2/I-Branching enzyme 50 299 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03169 Rops-Chr6 55272159 55277515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03169 1 396 Glycosyltransferase AT1G71070 69.949 0.0 588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03169 6 55272159 55277515 Rops6g03169 6 55272159 55277515 ECH