Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03160 ATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTTTCCACCCTAAAAAAGAAACGCAAACCAATGCAGACGGTGGAAATCAAGGTGAAAATGGACTGTGATGGCTGTGAAAGAAGAGTTCGGAATTCTGTTTCCAACATGTCAGGTGTGAAGGAAGTGGAGGTGAATAGAAAGCAAAGCAAGGTAACTGTGACTGGTTACGTGGATAGAAACAAGGTCCTAAAGAAAGTGCAGAGCACAGGAAAGAGAGCTGAGTTTTGGCCCTATGTTCAATATAACTTGGTGACATATCCCTATGTAGCACAGGCATATGACAAGAAGGCACCATCAGGGTATGTGAAAAACGTTGTCCAAGCACTCCCTAATCCAAATGCACCAGATGAGAAGCTCACCACCCTCTTCAGTGATGATAATCCTAATGCATGTTCAATCATGTAA 441 0.4286 MGALDFLSDYFSVSTLKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKEVEVNRKQSKVTVTGYVDRNKVLKKVQSTGKRAEFWPYVQYNLVTYPYVAQAYDKKAPSGYVKNVVQALPNPNAPDEKLTTLFSDDNPNACSIM* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03160 146 Gene3D - 10 89 - -
Rops6g03160 146 FunFam Heavy metal-associated isoprenylated plant protein 26 11 88 - -
Rops6g03160 146 Pfam Heavy-metal-associated domain 29 83 IPR006121 GO:0046872
Rops6g03160 146 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 25 144 IPR045181 GO:0046872
Rops6g03160 146 SUPERFAMILY HMA, heavy metal-associated domain 22 89 IPR036163 GO:0046872
Rops6g03160 146 ProSiteProfiles Heavy-metal-associated domain profile. 23 86 IPR006121 GO:0046872
Rops6g03160 146 CDD HMA 27 86 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03160 Rops-Chr6 55143122 55144762 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03160 6 55143122 55144762 Rops6g03160 6 55143122 55144762 ECH