Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03158 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATGGATGCAGAACAGCAGAAAGTAACAGTTTCAGGTAGTGTGGATTCTGCAACTTTGATCAAGAAACTGGTCAGATCTGGTAAATATGCTGAGCTCTGGTCTCAGAAGACTCATCAGAACCAAAAACAGAAGAACAACAATGTCAAAGATGACAAGAACAAAGGGCAGAAGCAAGGTCTGGCTAAGGGGCTTGAGGCCTTCAAGAATCAGCCTAAATTATCTACTTTTAGTTCTGAGGATGATGATGAATATTATGACTATGATGATGATGAAGATGATGAGGATGAAGAGATGAGGTTTATAAGGGAAAGAGCCAATCAACTGCAATTGCTGAGGCAGCAAGCAGCTGATGCAAATAATGTGAAAAAAGGTATTGGTGCCATTTCTGCAGTTTCCAACAATGGTAAGATGAACAATACTGGCAATGCCAATGGTGGCAAAAAAGGAGGCCCAAATCAGAATATGGGAATGAAGGACAACCCTGGTGTGCTTGATCAGAAAACCATGGCAGCACTGAAATTGAGCAATGCTCACTTGGGTGGTGAAAGCCTCAATCTTGGAGGAGCCAAAAGGGCAAGTGACATTGGTGCTATGATGAATTTAGCTGGGTTTAATGGGAATGGTGCTAATGTTGGTGGTAGTGCTACTGTTCTTGGTGGAAATTCCAATGGTTTGGGAGGCTTTCCTGTTCAGTCTAACAACATGATACCAGGATCCAATGCAGCTATTCCAAATGGTGGTTTTGCTTCAGGCCAATATCCATCATCTTTGCTAATGAACATGAATGGCTTCAATAACCATCCATCTCCATCCCCATCCCCATTAATGATGAACATGAACATGAACATGCAAGCTAGGCATGCCATGCAGCAACAACCTCAGATGATGTACAACAGGGCCCCTTTTATTCCTCCTAATACTGGCTATTACTACAATCATAATTCTAACTATAGCCCCGCAAATTACAACTATGCCATGCCTAGTTACCCTGCGGATGATCACTCTGCAGCACACATGTTCAGTGATGACAATACTAGCAGCAGCTGTTCAATAATGTAA 1191 0.4181 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQMDAEQQKVTVSGSVDSATLIKKLVRSGKYAELWSQKTHQNQKQKNNNVKDDKNKGQKQGLAKGLEAFKNQPKLSTFSSEDDDEYYDYDDDEDDEDEEMRFIRERANQLQLLRQQAADANNVKKGIGAISAVSNNGKMNNTGNANGGKKGGPNQNMGMKDNPGVLDQKTMAALKLSNAHLGGESLNLGGAKRASDIGAMMNLAGFNGNGANVGGSATVLGGNSNGLGGFPVQSNNMIPGSNAAIPNGGFASGQYPSSLLMNMNGFNNHPSPSPSPLMMNMNMNMQARHAMQQQPQMMYNRAPFIPPNTGYYYNHNSNYSPANYNYAMPSYPADDHSAAHMFSDDNTSSSCSIM* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03158 396 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 396 - -
Rops6g03158 396 MobiDBLite consensus disorder prediction 180 200 - -
Rops6g03158 396 MobiDBLite consensus disorder prediction 124 138 - -
Rops6g03158 396 MobiDBLite consensus disorder prediction 87 102 - -
Rops6g03158 396 Coils Coil 145 165 - -
Rops6g03158 396 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Rops6g03158 396 FunFam Copper transport protein ATOX1 11 80 - -
Rops6g03158 396 CDD HMA 16 75 IPR006121 GO:0046872
Rops6g03158 396 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
Rops6g03158 396 Gene3D - 12 84 - -
Rops6g03158 396 MobiDBLite consensus disorder prediction 80 138 - -
Rops6g03158 396 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03158 Rops-Chr6 55097593 55099850 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03158 6 55097593 55099850 Rops6g03158 6 55097593 55099850 ECH