Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03152 ATGGGTGTGAGAATGAGTGTTTTCTTTCACAATGACCAACTTGAACATAATGAAAATGTTTCATCTGTAGTTGATGCTTCTGACTGTGATGAAGGAAAATGGGAAGAGAAAGAGGAAGGAGAGTTAACCGAAGAAAGTGATGTGACAACAAACAATGATGGGGTACTGCACTTGGACACTAGTTCTCTTTGCCCCTTGCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAAGAACTAAACTCTCTCTTCTCCAAAGAGAAGGTTCAACAAGAAACCTATTTTGATCTGAAGAATGTGAATTTTGACTCTTGTCTCTCTCAGCCTCGTCGTGAGGCAGTAGAATGGATGCTTAAAGTGAATTCTCATTATGGATTCTCTGCTCTCACTGCAACACTGGCTGTTACTTACCTGGATATGTTCCTTTTAAGCTTCCATTTTCAAAGGAAGAAGCCATGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCAGCAAAGGTTGAAGAAACTCAAGTGCCTCTTCTCTTAGACCTTCAAGTGCAAGATGCCAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCTAGTGCTCTCCACACTCAAATGGAAGATGCACCCTGTGACCCCACTCTCGTTTCTAGATCACATGATAAGAAGGCTTGGATTGAAAACCCATCTTCACTTGGAGTTTCTCAGGCACTGTGAGCATCTTCTTCTATCTGTGCTTTTAGATTCAAGATTTGTTGGTGTTCTTCCTTCTGTATTGGCCACTGCGACCATGCTACATGTTATTGGAACTGTCTTCTGGCAGAGAAAATTGCCTTCTCCAGGATTCCCGGTTGAGGTTGTGGGTCATGATAAAGATGATGTGTTTTCAGATGGTGAGGCAGAGCATATTGCTTCTTCAAGACGCAAGCAAACAAGAGCACCTTCTGAAGCAGTTGAAACAGTTACAAATGCCACCAGAGAGTCTGAGTCAAAAAAACAAAAATTCAAATCAGATTGCAAATTTAACACATGCAACAGAACTAGTCTCGAGGTGCTGAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATTCTTCTGTTTTTATGTTCCGAGATGATGAGGACTACGAAAGTGATTGA 1143 0.4217 MGVRMSVFFHNDQLEHNENVSSVVDASDCDEGKWEEKEEGELTEESDVTTNNDGVLHLDTSSLCPLLLLEQDLFWEDEELNSLFSKEKVQQETYFDLKNVNFDSCLSQPRREAVEWMLKVNSHYGFSALTATLAVTYLDMFLLSFHFQRKKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDAKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHMIRRLGLKTHLHLEFLRHCEHLLLSVLLDSRFVGVLPSVLATATMLHVIGTVFWQRKLPSPGFPVEVVGHDKDDVFSDGEAEHIASSRRKQTRAPSEAVETVTNATRESESKKQKFKSDCKFNTCNRTSLEVLSSESEFKAMAADSSVFMFRDDEDYESD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03152 380 Pfam Cyclin, N-terminal domain 105 209 IPR006671 -
Rops6g03152 380 SMART cyclin_7 115 203 IPR013763 -
Rops6g03152 380 MobiDBLite consensus disorder prediction 304 335 - -
Rops6g03152 380 FunFam D3-type cyclin 103 210 - -
Rops6g03152 380 CDD CYCLIN_AtCycD-like_rpt2 212 269 - -
Rops6g03152 380 PANTHER CYCLINS 78 267 IPR039361 -
Rops6g03152 380 SUPERFAMILY Cyclin-like 74 210 IPR036915 -
Rops6g03152 380 MobiDBLite consensus disorder prediction 21 51 - -
Rops6g03152 380 Gene3D - 89 270 - -
Rops6g03152 380 Pfam Cyclin, C-terminal domain 212 278 IPR004367 -
Rops6g03152 380 CDD CYCLIN_AtCycD-like_rpt1 110 207 - -
Rops6g03152 380 SMART Cyclin_C_2 212 325 IPR004367 -
Rops6g03152 380 Gene3D - 91 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03152 Rops-Chr6 55006850 55008410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03152 21 272 Core Cell Cycle Gene Families AT4G34160 58.730 4.81e-94 284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03152 6 55006850 55008410 Rops6g03152 6 55006850 55008410 ECH
Rops10g01122 10 23274087 23276015 Rops6g03152 6 55006850 55008410 ECH
Rops9g02182 9 39938520 39940150 Rops6g03152 6 55006850 55008410 ECH
Rops1g01818 1 37415035 37416545 Rops6g03152 6 55006850 55008410 PCT