Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02517 ATGCTAGTGCCTCCCAAACCCATCAACACCTTCACCATCACCATCATGCTCGCCTTCACCTTCTTCCTCCTCTTCCTTTCCGGTTTCCTCCACTTCCCTTCCGTTTCCTCCTCTCTGCAACCCATCAACGGCCCCATCACGCCGGTGACCAGAACGACCGCCGGAGAACCCTTCACCGATCTGGTGGCTGCCTTCAGGAAATGGGACTCCCAAGTGGGTTGTGCTCGGTTCAAGGAGAAACTCAATGGGGTTGGCCTTAACAACTCAAAGGTTGCATCTTTGCAAGAGATTGGTGGTGATTCATCATGTGGGGGCTTGAAACTTAACCATGTTAGTGTTTTGGTCAAAGGGTGGACTTGGATTCCTGATAATTTGGATAACTTGTACTCTTGCCCTTGTGGGTTGAGCTGTTTGTGGACCAAATCGAATGTTCTTGCTGACAAGCCTGATGCTTTGTTTTTTGAAACGTCTACGCCTCCGATTCAGAGACGTGTGGGAGAACCACTTCGTGCTTACATGGATCTCGAAGCTGGCCGAAAGAGATCAGGTCGAGAGGATATATATATTAGTTATCATGCTGAAGATGATGTACAATCAACCTATGCTGGTGCTTTGTTTCACAATGGTCGAAACTATCACGTCTCCAATACTAAAAACAATGATATACTTGTTTATTGGTCTTCATCGCGGTGTCTTTCTCAAAGGAATGAACTAGCCAAGAAACTCCTTGGCTTGCTGCCACATCACTCATTCGGCAAGTGCCTAAATAATGTTGGCGGTTTAGACATGGCTCTTTCTTTTTATCCTGAGTGTGCAAATGATGTCAACGTTAAGCCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATAGAGAACACTTTTACTGAGAGTTATGTGACAGAGAAGTTATACTATGCCTTGGACTCTGGTGCGGTTCCTATCTATTTTGGTGCACCAAACGTGATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAGTCATTGGAAGAATTGGCTTCATATGTGAAGGCTTTAGCTAATGACCCAGTAGCGTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTGTTAGGTAACTATGGAAAAACGCGAGCGGTGAGCCTTGACACGTTGCCATGCCGGTTATGTGAGGCTGTTAGCAGAAAAGGTGGAAGAAATGCAAGAGGCTAG 1227 0.4531 MLVPPKPINTFTITIMLAFTFFLLFLSGFLHFPSVSSSLQPINGPITPVTRTTAGEPFTDLVAAFRKWDSQVGCARFKEKLNGVGLNNSKVASLQEIGGDSSCGGLKLNHVSVLVKGWTWIPDNLDNLYSCPCGLSCLWTKSNVLADKPDALFFETSTPPIQRRVGEPLRAYMDLEAGRKRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKNNDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFYPECANDVNVKPKWWDHLHCAMSHYKFVLAIENTFTESYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSLEELASYVKALANDPVAYAEYHAWRRCGVLGNYGKTRAVSLDTLPCRLCEAVSRKGGRNARG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02517 408 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 400 - -
Rops6g02517 408 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 133 400 IPR001503 GO:0006486|GO:0008417|GO:0016020
Rops6g02517 408 PIRSF FucT_plant 3 408 IPR017177 -
Rops6g02517 408 Gene3D - 170 375 IPR038577 -
Rops6g02517 408 FunFam Alpha-(1,4)-fucosyltransferase 170 376 - -
Rops6g02517 408 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 221 401 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02517 3 406 Xyloglucan Fucosyltransferase1 AT1G71990 68.317 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02517 K14412 - gmx:100791990 715.687