Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02385 ATGACGGACACCACAGATGATATTGCTGAGGAAATCTCGTTCCAGAGCTTCGATGATGATTGCAGGTTGCTTGGTAATCTTCTTAACGACATTCTCCAACGTGAGGTTGGCAACAATTTGGTTGAAAAACTCGAAAGGATTCGAGTCCTTGCTCAGAGTGGTTGTAATATGAGGCAGGCAGGTATTGTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCAGAGTTATCAAAGATGACACTTGAAGAAGCTCTCACTGTTGCTCGTGCCTTCAGCCATTATCTTAATTTGATGGGTATTGCTGAAACCCATCACAGGGTTCGTAAAGGAGGGAACATGGCACAAATTGCAAAATCATGCGATGATATATTTAACCAGCTGGTGCAGGGTGGAGTTTCCCCAGATGACCTTTATGACACAGTCTGCAAGCAGGAGCTTGAAATTGTTCTTACAGCTCATCCCACACAAATTAATCGCCGTACCTTACAATACAAACACATTAGAATTGCTCATCTCTTGGATTATAATGATCGACCTGATCTTAGCCTTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATCTGGCAGACAGATGAGCTTAGGCGCCAAAAACCCACTCCAGTTGATGAAGCTAGAGCTGGTTTGAATATTGTGGAGCAGTCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTCAGCAATGCTTTAAAGAAGCATACAGGAAAGCCACTACCATTGACTTGCACTCCCATAAGGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAACGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTATCCAGATGGATGGCAATTGACCTCTATATTCGGGAAGTGGATAGCCTCAGATTTGAGCTATCCATGAACCAGTGCAGTGATAGGTTGTCAAGATTGGCACATGAAATTCTAGAAGAATCTAACCGTGAGAATCGCCGTGAGAATTGGAATCAGTCTGTGAATAGGAGTCAGTCACTTCCAACACAACTCCCAGCTAGAGCTCATTTACCATCTTTTGCTGAAAATGGTGAATCTCTGCATCCTAGACTGGACATTCCAGGACCTGATCTCGTGCAACTCGATCACAAGGATGGTGGGGTTTCTCCAAGTGGCAATCCCAACATTCAATTATCACCTACAGCTTCAGCAAATTCCAGTGCTTCTTCAGCTGCATTTTCATCCTCTCCTTTCAACTCTAGTCAACTACTTGCTCCCAGGAAATTGCCTGCTGAATCCCAGACAGGAAGATCCAGTTTTCATAAGCTTTTGGAGCCAAAGCTCCCTCAACTTCCAGGAATTGCTCCTTACAGAGTTGTCCTGGGGAATGTAAAGGATAAGCTTGAGAGAAGCCGAAGACGGTTAGAACTTCTTCTTGAGGATGTTCAATGTGATTATGATCCTTTAGATTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTCCTCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGCTGGCTGATGGTCGACTTGCTGATCTGATTCGTAGAGTTGCTACATTCGGAATGGTGTTAATGAAGCTTGACTTGCGTCAGGAATCTGGGAGACATGCAGAAACACTTGATGCAATTATAAGGTATCTGGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACCAAAGAGCTGAAAGGGAAGAGGCCACTAGTTCCTGTTAGTATAGAGGTTCCTCCTGATGTTAAAGAAGTCTTGGATACATTCCGAATTGCTGCTGAACTAGGGAGTGATTCACTTGGAGCCTATGTGATCTCTATGGCCTCAAATGCAAGTGATGTCCTTGCAGTAGAGCTCTTACAGAAGGACGCGCGGCTTGCTGCTACTGGGGAGTTGGGAGGAGCATGTCCTGGTGGAACGTTGCGGGTGGTCCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATCCGAAAACTTTTATCAATAGACTGGTACCGTGAACACATCATTAAGAACCATAATGGGCATCAAGAGGTTATGGTTGGATACTCTGATTCTGGTAAAGATGCTGGCCGCTTTACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTAGCTGCTTGCAACGATTATGGTATAAAGGTTACACTGTTCCATGGCCGTGGAGGCAGTATTGGTCGAGGTGGTGGCCCAACATATCTGGCTATTCAGTCCCAACCACCTGGGTCTGTGATGGGAACACTCCGATCTACTGAGCAGGGAGAGATGGTAGAGGCCAAGTTTGGGTTGCCACAGATAGCTGTTAGACAACTTGAAATATACACAACAGCAGTGCTACTTGCAACCCTTCGTCCACCTCTCCCACCCCGAGAAGAAAAATGGCGCAATCTTATGGAAGAGATATCAAAGATCAGTTGCCAGTGTTACCGCAACGTAGTTTATGAAAATCCAGAATTCCTTTCCTACTTCCATGAAGCCACACCTGAAGCTGAACTTGGCTTCCTTAACATAGGTAGCCGCCCTGCAAGAAGGAAGAGCTCAACAGGAATTGGACATCTCCGTGCCATTCCCTGGCTATTTGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTAGGAGCAGGTTTAAAAGGTGCTTGTGAGAAAGGTCATACTGAAGAGCTAAAAGCCATGTACAAAGAATGGCCTTTCTTTCAAAGTACAATAGACCTTATTGAGATGGTTTTGGGGAAAGCAGACATTCCTATAGCCAAGCACTATGATGAAGTCCTTGTGTCAGAGAAGAGGCAAGAGCTTGGTCGTGAGCTAAGAAGTGAGCTCATGACAACTGAAAAGTTCGTGTTGGTGATTAGTGGGCATGAGAAACTTCAGCAGAATAATAGGAGCTTGAGGAGGCTTATTGAGAATAGGCTTCCCTTTCTCAATCCCTTGAACATGTTGCAGGTTGAGATACTCAAGAGGTTAAGACGTGATGATGACAACCTTAAAATAAGAGATGCTTTGCTTATCACCGTAAATGGGATTGCTGCTGGGATGAAGAATACAGGTTGA 3117 0.4466 MTDTTDDIAEEISFQSFDDDCRLLGNLLNDILQREVGNNLVEKLERIRVLAQSGCNMRQAGIVNMAELLEKQLASELSKMTLEEALTVARAFSHYLNLMGIAETHHRVRKGGNMAQIAKSCDDIFNQLVQGGVSPDDLYDTVCKQELEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSLEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIRFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNQCSDRLSRLAHEILEESNRENRRENWNQSVNRSQSLPTQLPARAHLPSFAENGESLHPRLDIPGPDLVQLDHKDGGVSPSGNPNIQLSPTASANSSASSAAFSSSPFNSSQLLAPRKLPAESQTGRSSFHKLLEPKLPQLPGIAPYRVVLGNVKDKLERSRRRLELLLEDVQCDYDPLDYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAIIRYLDMGTYSEWDEEKKLDFLTKELKGKRPLVPVSIEVPPDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAATGELGGACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPLPPREEKWRNLMEEISKISCQCYRNVVYENPEFLSYFHEATPEAELGFLNIGSRPARRKSSTGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGHTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSEKRQELGRELRSELMTTEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNLKIRDALLITVNGIAAGMKNTG* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02385 1038 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1038 IPR022805 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1038 IPR015813 GO:0003824
Rops6g02385 1038 MobiDBLite consensus disorder prediction 388 410 - -
Rops6g02385 1038 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 696 708 IPR033129 -
Rops6g02385 1038 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Rops6g02385 1038 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 3 1038 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 MobiDBLite consensus disorder prediction 326 348 - -
Rops6g02385 1038 Pfam Phosphoenolpyruvate carboxylase 19 333 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 Pfam Phosphoenolpyruvate carboxylase 450 1038 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Rops6g02385 1038 Coils Coil 459 483 - -
Rops6g02385 1038 Gene3D Phosphoenolpyruvate/pyruvate domain 404 532 - -
Rops6g02385 1038 Gene3D Phosphoenolpyruvate/pyruvate domain 289 364 - -
Rops6g02385 1038 FunFam Phosphoenolpyruvate carboxylase 4 412 532 - -
Rops6g02385 1038 MobiDBLite consensus disorder prediction 362 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02385 Rops-Chr6 43472504 43482458 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02385 6 43472504 43482458 Rops6g02385 6 43472504 43482458 ECH