Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02370 ATGATCTCTGCTCCTTCTCTACCTTCTAAGTTGCAGGAACTTCAATCAGAAGAAAAAAGGGTGGATAATGGCCCCTCTCGCAGGGCCAAATGGTGGTACTCAACTTTCCACTCAGTGACAGCCATGATAGGTGCAGGTGTTCTCAGCCTGCCCTATGCCATGGCATATCTAGGATGGGGTCCAGGGATCTTGATGTTGTTTCTATCATGGTGTCTGACCTTAAACACAATGTGGCAAATGATCCAGTTACATGAATGTGTTCCAGGGACTCGTTTTGATCGATATCTTGATCTTGGTCGACATGCTTTTGGACCAAAACTTGGACCATGGATTGTGCTCCCCCAGCAACTAATTGTCCAGGTTGGATGTGACATTGTCTACATGGTTACTGGAGGGAAGTGCCTCAAGAAGTTCATGGAGATAGCATGCACCAATTGCACACAACTAAGGCAGTCTTACTGGATTGTGATTTTTGGTGCCATCCATTTCTTTTTATCTCAGCTTCCCAATTTCAACTCTGTTGCTGGGGTTTCTTTAGCAGCAGCTGTGATGTCATTAAGCTATTCAACTATAGCCTGGGTGGCTTGCTTGGCTAGAGGTCGGATTGACAATGTTAGCTATGCTTACAATAAAACCAGCACAACTGATTTCATGTTCCGGGTCTTCAATGCATTTGGTCAAATCTCATTTGCATTTGCTGGCCATGCAGTGGTCCTTGAAATTCAGGCTACAATTCCATCAACCCCTGAGAAACCCTCAAAGATAGCAATGTGGAAAGGTGCTATTGGTGCCTATTTCATCAATGCAATATGCTATTTCCCAGTTGCACTTATAGGATACTGGACTTTTGGGCAAGCTGTTGATGATAATGTGCTTATGGCACTTGAAAGGCCCTCATGGCTCATTGCCTCTGCTAACTTGATGGTATTCATCCATGTTGTTGGTAGCTACCAGGTTTATGCCATGCCTGTTTTTGACTTGATTGAGAGGATGATGATTAGAAGATTGAATTTCTCTCCAGGACTAGCACTCAGACTTGTTGCTCGATCTGCTTATGTAGCTTTTACGTTATTAATTGGGGTCACTTTCCCTTTCTTTGGTGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGCATCATGTGGTTGATAATCAAGAAGCCAAAGAGATTCAGCGCCAACTGGTTCATCAATTGGGCTGCAATATACATAGGAGTATGCATTATGTTGGCATCTACGGTTGGTGGCTTGAGGAATATTGTTACTGATGCATCCAGTTATAGTTTCTATACCTAA 1320 0.4326 MISAPSLPSKLQELQSEEKRVDNGPSRRAKWWYSTFHSVTAMIGAGVLSLPYAMAYLGWGPGILMLFLSWCLTLNTMWQMIQLHECVPGTRFDRYLDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACTNCTQLRQSYWIVIFGAIHFFLSQLPNFNSVAGVSLAAAVMSLSYSTIAWVACLARGRIDNVSYAYNKTSTTDFMFRVFNAFGQISFAFAGHAVVLEIQATIPSTPEKPSKIAMWKGAIGAYFINAICYFPVALIGYWTFGQAVDDNVLMALERPSWLIASANLMVFIHVVGSYQVYAMPVFDLIERMMIRRLNFSPGLALRLVARSAYVAFTLLIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPKRFSANWFINWAAIYIGVCIMLASTVGGLRNIVTDASSYSFYT* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02370 439 Pfam Transmembrane amino acid transporter protein 28 423 IPR013057 -
Rops6g02370 439 FunFam Lysine histidine transporter 1 24 434 - -
Rops6g02370 439 PANTHER OS05G0424000 PROTEIN-RELATED 29 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02370 Rops-Chr6 43131456 43134030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02370 10 438 Organic Solute Cotransporters AT1G25530 75.291 0.0 655
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02370 6 43131456 43134030 Rops6g02370 6 43131456 43134030 ECH