Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02331 ATGGCACTCTCGCGCCTTCGTCACCCTCTCTTCTCTCGTTCCCTTCGTCTCCTCTCTTCCTCATCCTCCAGATCTTTTTCTCGAACTTCTAATTCCTGGAATTTTTCTGTGGGTGGTGATCAGAATCTGAGGCCTGCACCTTGGTCTAGGCTTACCGGAGTTTGTGATAGACCTTTGAAGTCAAAGTGGATCGGTGTCAAATACTTCTCATCTTCAGATTCTTCACATATGGTCGTTGGGATGCCAGCTTTATCTCCTACAATGACCCAAGGTAATATTGCAAAATGGAGGAAGAAAGAAGGAGATAAGATAGAAGTGGGTGATATACTATGTGAAATTGAAACCGACAAAGCTACACTTGAATTTGAAACTCTTGAAGAGGGATTTCTTGCTAAGATATTGGCACCTGAAGGTTCAAAGAATGTACCTGTTGGACATCCAATTGCAATAACAGTTGAGGATGAAAATGACATTCAAAATGTTCCTGCTTCCGTGGGGGGTGAGGCCAGGATTGAAGAGAAGAAACCAACACATCAGGATGTCTCGGATGAAGAGAGGAAATCAGAATCAACTGCTACGATTAATGCATCAGAACTTCCACCACATGTTCTTCTTGAAATGCCAGCTTTGTCCCCAACAATGAACCAAGGAAACATAGCTAAATGGAGGAAAAAAGAAGGAGACAAGATTGAAGTGGGTGACATATTATGTGAGATAGAGACAGACAAAGCTACCCTTGAATTTGAAACTCTCGAAGAGGGGTACCTGGCTAAGATACTTGCACCAGAAGGTTCAAAAGAAGTGGCAGTTGGACAGCCTATTGCAATAACAGTTGAAGATGCAAGTGATATTGAAGCTGTAAAGAATTCTATCAGCAGCAGCTCAGCAAGCCAACAGGAGAAGGCCACCCAACATGACACTAACAGTGAGGTCAAAGCACCTAAAAGTAATACAAAACGAATCAGTCCAGCTGCAAAGTTGCTGATTACAGAATATGGATTGGATGAGTCGACTATTAATGCCACTGGTCCTCATGGCACCCTACTGAAAGGGGATGTTCTTTCTGCAATTAAGTCAGGAAAATTGTCTCCAAAACATGCTTCATCTAAAGCACAGGCATCATCATCTCAAAGTCATCAAGTTGCAACTTCACAAGAGTCAAAGTCTGACTTAAAGCAGCCAGATGCTTACGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGGTTATTGGAATCAAAACAAAATACACCACACTTATATTTATCATCAGATGTTATACTGGATCCTCTTCTTTCCCTTCGGAAGGATCTTAAAGAGCAGTATGACGTTAAAGTTTCGGTGAATGACATTATCATCAAAGTTGTAGCAGCTGCTCTTAAAAATGTACCAGAAGCAAATGCATACTGGAATGATGAGAAGGGTGAGGTCATTTTATGTGATTCTGTCGACATAGCGATAGCAGTTGCCACTGAGAAGGGCTTGATGACGCCAATAATAAAAAATGCTGATCACAAGACAATATCCGCTATCTCCTCAGAGGTCAAGGAACTAGCTGCAAAGGCACGTGCAGGCAAGTTGATGCCGCATGAATTCCAGGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTTTCCTGTGGATAAATTCTGTGCTATTATAAACCCCCCACAGGCTTGCATTCTTGCTGTAGGGAGAGGCAACAAAGTTGTGGAACCTGTAATTGGAGCTGATGGAATTGAGAAGCCATCAGTTGCCACTAAGTTGAATTTAACGTTGTCTGCCGATCATCGTGTCTTTGATGGCAAAGTTGGAGGTGCATTTCTCTCTGCTTTGCAATCAAACTTCAGTGATATAAGACGACTTCTTTTATGA 1884 0.4209 MALSRLRHPLFSRSLRLLSSSSSRSFSRTSNSWNFSVGGDQNLRPAPWSRLTGVCDRPLKSKWIGVKYFSSSDSSHMVVGMPALSPTMTQGNIAKWRKKEGDKIEVGDILCEIETDKATLEFETLEEGFLAKILAPEGSKNVPVGHPIAITVEDENDIQNVPASVGGEARIEEKKPTHQDVSDEERKSESTATINASELPPHVLLEMPALSPTMNQGNIAKWRKKEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSKEVAVGQPIAITVEDASDIEAVKNSISSSSASQQEKATQHDTNSEVKAPKSNTKRISPAAKLLITEYGLDESTINATGPHGTLLKGDVLSAIKSGKLSPKHASSKAQASSSQSHQVATSQESKSDLKQPDAYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVILDPLLSLRKDLKEQYDVKVSVNDIIIKVVAAALKNVPEANAYWNDEKGEVILCDSVDIAIAVATEKGLMTPIIKNADHKTISAISSEVKELAAKARAGKLMPHEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEPVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSALQSNFSDIRRLLL* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02331 627 Gene3D - 381 627 IPR023213 -
Rops6g02331 627 CDD lipoyl_domain 77 150 - -
Rops6g02331 627 MobiDBLite consensus disorder prediction 365 390 - -
Rops6g02331 627 CDD lipoyl_domain 207 276 - -
Rops6g02331 627 Pfam Biotin-requiring enzyme 205 276 IPR000089 -
Rops6g02331 627 Pfam Biotin-requiring enzyme 79 150 IPR000089 -
Rops6g02331 627 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 626 IPR001078 GO:0016746
Rops6g02331 627 SUPERFAMILY Single hybrid motif 76 165 IPR011053 -
Rops6g02331 627 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 IPR003016 -
Rops6g02331 627 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 382 625 - -
Rops6g02331 627 SUPERFAMILY Single hybrid motif 203 296 IPR011053 -
Rops6g02331 627 SUPERFAMILY CoA-dependent acyltransferases 392 627 - -
Rops6g02331 627 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 101 130 IPR003016 -
Rops6g02331 627 ProSiteProfiles Biotinyl/lipoyl domain profile. 202 278 IPR000089 -
Rops6g02331 627 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 190 627 IPR045257 GO:0006086|GO:0045254
Rops6g02331 627 MobiDBLite consensus disorder prediction 289 316 - -
Rops6g02331 627 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 198 302 - -
Rops6g02331 627 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 313 359 IPR036625 GO:0016746
Rops6g02331 627 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 205 618 IPR006257 GO:0004742|GO:0006090|GO:0045254
Rops6g02331 627 Gene3D - 70 175 - -
Rops6g02331 627 Gene3D - 200 303 - -
Rops6g02331 627 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 72 176 - -
Rops6g02331 627 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 320 357 IPR004167 GO:0016746
Rops6g02331 627 Pfam e3 binding domain 320 354 IPR004167 GO:0016746
Rops6g02331 627 Gene3D - 320 361 IPR036625 GO:0016746
Rops6g02331 627 MobiDBLite consensus disorder prediction 168 191 - -
Rops6g02331 627 MobiDBLite consensus disorder prediction 289 318 - -
Rops6g02331 627 MobiDBLite consensus disorder prediction 360 398 - -
Rops6g02331 627 ProSiteProfiles Biotinyl/lipoyl domain profile. 76 152 IPR000089 -
Rops6g02331 627 MobiDBLite consensus disorder prediction 165 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02331 Rops-Chr6 42412285 42425547 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02331 195 627 Acyl Lipid Metabolism Gene Families AT1G54220 42.919 1.28e-108 336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02331 6 42412285 42425547 Rops6g02331 6 42412285 42425547 ECH