Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02337 ATGGTTACTTTAATGTACCAAAACTCTAGTTTTGGACCTTTTGAGGGGTTTTGGAAAGGCAAACTACTAGGAGGGAGAGCTCAGAATGTTACAGCAGAGTTGTTAACTGGTGGACCAAACGTTACAACTAATGGCTTTGAATTGGGAGGAACACTCCAAAATACAACACTTAAGAACTTAGGAGGAAGAAATGAGAGTATTAACCGTGAGAGAAGTGATGATAAGGTGCTGAAAGGGGGCACTCAAAATGGTACCGCAACTGAAGGAAGAACTAAGAATATAACAGCAGCATATGTAGACTTGAAAAATGGCTCATTGACAAATTCAACAAATAATTCAACCTCACATACTAGGGTCCATGATGACAAAGACAAACTGCTTGATGGATTGTTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGCTGCAATCCCAATTGTACCGCAAGGCTTCTTCTAACAAGCCATCTCCATATTTGATATCTAAACTACGTAACTATGAAGAAATTCATAGAAGGTGTGGACCTTATAGTAGGGCTTACACCAGAAGCATGATAAGGATTGTACGTTCTAAGAACAACGGTGCTGCTGCAATGTGTAAATATGTTGTGTGGACACCTGCCAATGGTTTAGGGAACCAAATGATTAGCTTAGCTGCAACATTTCTTTATGCTGTCCTCACAAACCGAGTGTTGCTTGTGAAATTTGGGAAAGACAAGCATGGCCTATTTTGCGAGCCATTTCTCAATTCAACATGGATATTGCCTCAGAAGTCTCCATTTTGGAATGAAGAGCATGTCAAAACATATCAGAGCATGATAGAGAATGGCAGGTCTAACAATTCAATGGTGGAATTACCATTAGTTCTGTTTATTAACCTACAACACTCCCGCAGTGATCCAGAGAAATTTTTTCACTGTGATCATAGTCAAGATCTTCTCCGGAAGGTTCCTTTGCTGATTTTGCAATCAGATCAGTACTTTGTCCCTTCCATGTTCATGACCCCATTTTTCAAGCCGGAGCTCAACAAAATGTTCCCAGAAAAATTCACAGTTTTCCACCATTTGGGGCGCTACCTTTTCCACCCTTCAAATGAGGTATGGGGACAAATCAGCAGGTTCTATCAGGCACACTTGGCCAAGGCAGATGAGAGGATAGGCCTCCAGATAAGAGTGTTTAATCCTGTTTCCACTCCACCTCAAGCAATTATGGATCTAGTTTTAAACTGCACCATAAAGCACAAGCTTCTGCCAGATGTAGGTATGCCAAATTCATTATCTTCTACTGGCAAAAACCATACTACAAAGGCTGTTCTTGTGGCATCTTTACATCCAGAATATGGAGACAATTTAAGGGCTATGTATCTGAAAAGACCAACTGTTACTGGGGAAGTAATAGAGGTTTATCAGCCAAGTCATGAAAACCATCAAAAGTCTAATGATAATAAGCATAATATGAAGGCCTGGATGGACATGTATCTACTAAGTTTATCTGATGTATTGGTGACTACTTCTCTGTCAACTTTTGGTTATGTTGCTCAGGGTTTGGGGAATTTGAGGCCATGGCTTCTTTACAGGCTAGTGAAAAACGAGACTCATTTTCCATCTTGTGAACGGGACTTCTCATTGGAGCCTTGTTATCATGTTCCTCCCAAGCATTACTGCAATGGAAAGCCCATAAAAGATATTGCTTCTTTCCTTTACTTGAGGGAATGCAAGGATGCTTGGTATGGAGTGAAGCTGGTCAATGATATTTCACTGCAAGCAAGTTCTCAACCAACTGAAATGGGTATAATCAGGAGTTGCTTCTCTTTCATAGCAGGGACTGTCGTTGGGGTTTACGTGGCTCAGAATTACCAAGTTCCTAACCTCAGGAAGCTAACTGACGATGCCTTGTACCAGGCGAAGCAAGTTGAGGAAAAATACCGCAAGAATAAGAAGAAGGGTGGTGGTGATGATAAATAA 1968 0.4096 MVTLMYQNSSFGPFEGFWKGKLLGGRAQNVTAELLTGGPNVTTNGFELGGTLQNTTLKNLGGRNESINRERSDDKVLKGGTQNGTATEGRTKNITAAYVDLKNGSLTNSTNNSTSHTRVHDDKDKLLDGLLASGFDEASCISRLQSQLYRKASSNKPSPYLISKLRNYEEIHRRCGPYSRAYTRSMIRIVRSKNNGAAAMCKYVVWTPANGLGNQMISLAATFLYAVLTNRVLLVKFGKDKHGLFCEPFLNSTWILPQKSPFWNEEHVKTYQSMIENGRSNNSMVELPLVLFINLQHSRSDPEKFFHCDHSQDLLRKVPLLILQSDQYFVPSMFMTPFFKPELNKMFPEKFTVFHHLGRYLFHPSNEVWGQISRFYQAHLAKADERIGLQIRVFNPVSTPPQAIMDLVLNCTIKHKLLPDVGMPNSLSSTGKNHTTKAVLVASLHPEYGDNLRAMYLKRPTVTGEVIEVYQPSHENHQKSNDNKHNMKAWMDMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYRLVKNETHFPSCERDFSLEPCYHVPPKHYCNGKPIKDIASFLYLRECKDAWYGVKLVNDISLQASSQPTEMGIIRSCFSFIAGTVVGVYVAQNYQVPNLRKLTDDALYQAKQVEEKYRKNKKKGGGDDK* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02337 655 Gene3D - 367 526 - -
Rops4g02337 655 Gene3D - 199 252 - -
Rops4g02337 655 Pfam Xyloglucan fucosyltransferase 116 556 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops4g02337 655 MobiDBLite consensus disorder prediction 60 91 - -
Rops4g02337 655 Pfam Domain of unknown function (DUF4535) 602 645 IPR027854 -
Rops4g02337 655 PANTHER FUCOSYLTRANSFERASE 2-RELATED 108 584 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops4g02337 655 FunFam Galactoside 2-alpha-L-fucosyltransferase 199 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02337 Rops-Chr4 50491863 50496399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02337 122 583 Xyloglucan Fucosyltransferase1 AT2G03220 50.213 2.01e-158 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02337 K13681 - gmx:100818288 805.053