Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02336 ATGGAAACCTTTCAAGTCACAATGGACAAGATGGGGCAGAGTTCCAAGAGATTCACGACATTCTTTGCTGTATCTTTCATAGCTTTTCCTGTTGTCATCATAGTTACTTTAATGTACCAAAACTCAAGCTTCTCTCTTTTTGAGGGCTTATCAAAAGGGAAAGTCTTCGGAGAAAAAGCTCAGAACATTACAAGTGAGTTGTTACGTAGTGGGCCAAACATTACAACCAATGGCTTTCCATTGGGAGGAAGAGTCCACAATATATCATATGAGAACACAGGAGGAAGATCTAATAATACCATGTCAGAGGTGCAAGGGAAAATTCAGAATGTTGCCGGTACTGAAGAAAGAGCTTCAGCTAAGAATATTGTCTCATCACAAGTAGGCTCGACACACGGCTCATTCACAAGTTCAACAAATGATTCAACCCCAAAGACTAGCATCCATGATGATTACAAAGACAAACTGCTTTATGGACTGTTAGCTTCTGGATTTGATGAAGCATCATGCGTAAGCAGGCTGCAATTCCCGTTATACCGCAAAGCTTCTCCTCACAAACCATCTCCATATTTGATATCTAAACTACGTAACTATGAAGAAATTCATAGAAGGTGTGGACCTAATGGTATAGCTTACAACAAAAGCATGATAAAGATTGTACGTTCTGAGAACAATGGTGCTGCTGCAATGTGCAAATACGTTGTGTGGATACCTGCCAATGGTTTGGGGAACCAAATGATTAGCATAGCTGCAACATTTCTTTATGCTATTCTCACAGACCGAGTGTTGCTTGTAAAATTTGGGAAAGACAAGCATGGCCTATTTTGCGAGCCATTTCTCAATTCAACTTGGATATTACCTGAGAAGTCTCCTTTTTGGAAGAATGAAATGCATGTCCAAACATATCAGAGCTTGCTAAAGCAAGACATGGCTAACACTTCAAAGGTGGAATTACCTTCAGCTCTTTTTCTTAATCTACAGCACACCCTTACTGACCCAGAGAAATTCTTTCACTGCGATCATAGTCAACATCTTCTCCGGAAGGTTCCTTTGCTGATTTTGCAGTCAGATCAGTACTTTGTCCCTTCTATGTTCATGACCCCATTTTTCAACCCTGAGCTCAACAAAATGTTCCCAGAAAAAGACACCGTTTTCCACCATTTGGGGCGCTTCCTTTTCAACCCTTCTAATGAGGCATGGGGACTAATCAGTAAGTTCTATCAGGCACACTTGGCCAAGGCAGATGAGAGAATTGGCATCCAGATAAGGGTATTTAGTCCTGCTTCCACTCCACAGCAAACAATTATGGATCTAGTTTTGAAATGCACCACAAACCACAAGCTACTGCCAGAAGTAGGTATGCCGAAGTCAGTGTCTTCTACAGGCAAAAACCATACTGTAAAGGCTGTTCTTGTGGCATCTTTATATCCAGAATATGGCGAGAATTTAAGGGCTATGTATCTGAAAAAACCAACTGTTACTGGGGAAGTAATAGAAGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGTTTGATGATAATATGCATAATATGAAGGCCTGGACTGACATGTATCTACTAAGTTTATCTGACAAATTGGTGACTACCTCAGTATCTACTTTCGGTTATGTTGCTCAGGGTTTGGGAAATTTGAGGCCATGGCTTCTTCACAAGCTAGTCAAGACCCAGTCCCATTTGCCAAACTGTGAACGGGAAATCTCATTGGAACCTTGTTATCATCATCCTCCCAAGCATTACTGCAACGGAAAGCCCCTGAAAGATTTTGCTTCTTCTTTCCTTTATCTGAGCAGATGCAAGGATGCTTGGTATGGCGTGAAGCTGGTTAATGGCTCTGAATAG 1860 0.4118 METFQVTMDKMGQSSKRFTTFFAVSFIAFPVVIIVTLMYQNSSFSLFEGLSKGKVFGEKAQNITSELLRSGPNITTNGFPLGGRVHNISYENTGGRSNNTMSEVQGKIQNVAGTEERASAKNIVSSQVGSTHGSFTSSTNDSTPKTSIHDDYKDKLLYGLLASGFDEASCVSRLQFPLYRKASPHKPSPYLISKLRNYEEIHRRCGPNGIAYNKSMIKIVRSENNGAAAMCKYVVWIPANGLGNQMISIAATFLYAILTDRVLLVKFGKDKHGLFCEPFLNSTWILPEKSPFWKNEMHVQTYQSLLKQDMANTSKVELPSALFLNLQHTLTDPEKFFHCDHSQHLLRKVPLLILQSDQYFVPSMFMTPFFNPELNKMFPEKDTVFHHLGRFLFNPSNEAWGLISKFYQAHLAKADERIGIQIRVFSPASTPQQTIMDLVLKCTTNHKLLPEVGMPKSVSSTGKNHTVKAVLVASLYPEYGENLRAMYLKKPTVTGEVIEVYQPSHEEHQKFDDNMHNMKAWTDMYLLSLSDKLVTTSVSTFGYVAQGLGNLRPWLLHKLVKTQSHLPNCEREISLEPCYHHPPKHYCNGKPLKDFASSFLYLSRCKDAWYGVKLVNGSE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02336 619 FunFam Galactoside 2-alpha-L-fucosyltransferase 229 280 - -
Rops4g02336 619 Gene3D - 402 564 - -
Rops4g02336 619 Gene3D - 229 282 - -
Rops4g02336 619 PANTHER FUCOSYLTRANSFERASE 2-RELATED 44 617 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops4g02336 619 Pfam Xyloglucan fucosyltransferase 132 587 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02336 Rops-Chr4 50487127 50489212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02336 154 615 Xyloglucan Fucosyltransferase1 AT2G03220 49.679 7.26e-159 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02336 K13681 - gmx:100809919 846.269