Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g02335 ATGGACCAAAACTCACTCTACTTCCTTAATGGACTTGGCAAAGTTAAGGTGCCAGGGAAAATTCAAAATGTCACTGGTACTGAAGAAAGAACTTCAGCTAAGAATATTGTCTCATCAGAAGTAGGCTTAAAAAATGGCTCACTGACAAGTTCAACAAATGATTCAAACCTGAATACTAGGATCCATGATGACAAAGACAAACTGCTTGATGGACTGTTAGCTTCAGGATTTGATGAAGCATCATGCTTAAGCACGCTGCAATCCCAGTTATACCGCAAAGCTTCTCCTCACAAACCATCTCCATATTTGATATCTAAACTACGTAACTATGAAGAAATTCATAGAAGGTGTGGACCTTATAGTATCGCTTACAACCAAAGCATGACAAAGATTCTACGTTCTGAGAACAATGGTGCTACTGCAATGTGTAAATACGTTGTGTGGACACCTGCCAATGGTTTGGGGAACCAAATGATTAGCATAGCTGCAACATTTCTTTATGCTGTCCTCACAAACCGAGTGTTGCTTGTGAAATTTGGGAAAGACAAGCATGGCCTATTTTGTGAGCCATTTCTCAATTCAACTTGGATATTGCCTCAGAAGTCTCCTCTTTGGAAGCATGAAATGCATGTCCAAACATATCAGAGCTTGCTAAAGCAAGACATGTCTAACACTTCAAAGGTGGAATTACCATCAGCTCTTTTTCTTAATCTACAACACACCCTCACTGACCCAGAGAAATACTTTCACTGTGATCACAGTCAAGATCTTCTTCGGAAGGTTCCTTTGCTGATTTTGCAGTCAGATCAGTACTTTGTCCCTTCTATGTTCATGACCCCATTTTTCAACCCTGAGCTCAACAAAATGTTTCCAGAAAAGGACACGGTTTTCCACCATTTGGGGCGCTACCTTTTCCACCCTTCAAATGAGGCATGGGAAGTAATCAGCAAGTTCTATAAGGCACACTTGGCCAAGGCAGATGAGAGGATAGGCATCCAGATAAGGGTATTTAATCCTGCTTCCACTCCACAGCAAGTAATTATGGATCTAGTTTTGAGATGCACCATAAAGCACAAGCTTCTGCCAGAATTAGGTAAGCCAAATCCAGTGTCTTATACTGGCAAAAACCATACTGCAAAGGCTGTTTTGGTGGCATCTTTATATCCACAGTATGGCAACAATTTAAGGGCTATGTATCTTAATAAACAAACTGTTACTGGGGAACTAATAGAGGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGCTTAATGATAATAAGCATAATATGAAGGCTTGGACTGACATTTATCTATTAAGTTTATCTGACGCGTTGGTGACTTCCTCTTTATCTACTTTTGGATATGTTGCTCAGGGTTTGGGGAATTTGAGGCCATGGCTTCTTTACAGGCAAGTCAGTAACGAGACTCATTCTCCATCTTGTGAACGAGACTTCTCATTGGAGCCTTGTTATCATGTTCCTCCCAAACATTACTGCAATGGAAAGCCCATAAAAGATTTTGCTTCTTCTTTCCTTTACTTGAGGGCATGCAAGGATTTTTCTTATGGAGTGAAGCTGGTTAATGGTTCTGAATAG 1596 0.4041 MDQNSLYFLNGLGKVKVPGKIQNVTGTEERTSAKNIVSSEVGLKNGSLTSSTNDSNLNTRIHDDKDKLLDGLLASGFDEASCLSTLQSQLYRKASPHKPSPYLISKLRNYEEIHRRCGPYSIAYNQSMTKILRSENNGATAMCKYVVWTPANGLGNQMISIAATFLYAVLTNRVLLVKFGKDKHGLFCEPFLNSTWILPQKSPLWKHEMHVQTYQSLLKQDMSNTSKVELPSALFLNLQHTLTDPEKYFHCDHSQDLLRKVPLLILQSDQYFVPSMFMTPFFNPELNKMFPEKDTVFHHLGRYLFHPSNEAWEVISKFYKAHLAKADERIGIQIRVFNPASTPQQVIMDLVLRCTIKHKLLPELGKPNPVSYTGKNHTAKAVLVASLYPQYGNNLRAMYLNKQTVTGELIEVYQPSHEEHQKLNDNKHNMKAWTDIYLLSLSDALVTSSLSTFGYVAQGLGNLRPWLLYRQVSNETHSPSCERDFSLEPCYHVPPKHYCNGKPIKDFASSFLYLRACKDFSYGVKLVNGSE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g02335 531 Pfam Xyloglucan fucosyltransferase 49 499 IPR004938 GO:0008107|GO:0016020|GO:0042546
Rops4g02335 531 Gene3D - 140 194 - -
Rops4g02335 531 FunFam Galactoside 2-alpha-L-fucosyltransferase 141 192 - -
Rops4g02335 531 PANTHER FUCOSYLTRANSFERASE 2-RELATED 53 529 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g02335 Rops-Chr4 50475182 50476906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g02335 53 527 Xyloglucan Fucosyltransferase1 AT2G03220 49.375 6.21e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g02335 K13681 - gmx:100809919 767.689