Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02763 ATGGATCTACAAAGTCCCCAGGAGAATGTGTTTGCAAGTGCTGAAGAAGAGGAAACAACGTCGTTGCCACCTGCAAGCTACCGGAGAGGGGCTGTTTCTGCTACTACACTATTGCGCGTGCGGATGTTGCGACAATGTCGGCTTTTGGGTCTACCTCATTTGGATTTAGCAACATCAGGGAAAGGGGGAATTGGACCTTATATTGGTTTATGTGCACTTTCTGGTTGTTTTGGAATTGCACATGCTTTTGTCCAAGGTGGCGTGGCTGGAGACCTGTCCTTTATGTGTCCTGAGTTCATTCAGTCTTTTATTGCTGGTGTAAATGCCTCAGGAGCTCTAGCCTCTGTTTTGAGACTTCTCACCAAAGTTGGTTTTGAGAAATCTGATAATGGTCTTCGCAAAGGGGCTTTGTTAACCTTTGCAATCTCTACATTTTCTGAGCTTTTGTGCATTATCCTGTATGCAATCTACTTCCCTAAGTTGTCCATAGTCAAATACTACCATTCAAAGGCAGCCTTGGAAGGATCAAAAACTGTTTCAGCTGATGTTGGTGCTACCTGTGTTGGAAATGAGACAAATCAACAAGTTGAATTTCATGCTAATCAACAAGACCGGTTAAGCAATAAGCAACTATTTCTTCAAAACATTGATTATGCAGCTGCCTTGTTTCTGACATATGTGCTAAGCCTGTCTATTATGCCTGGATTCTTGTATGAAGATACCGGATCGCACCAGCTAGGAACATGGTACCCACTTGTTTTGATTCTGATGTACAACATCATGGATCTAATATCTTCATATATTCCTCTCATCAAATGCTTGAAGTTGGAATCTAGGAAGGGCTTACTCATTGCAACACTTTCTCGATTCTTGTTGGTCCCTGCATTTTACTTCACAGCAAAATATGGTGACCAGGGATGGATGATCCTGCTTGTATCTTTCTTGGGACTAACCAATGGCTATCTCACTGTTTGTGTATACACTGTGGTACCAAAAGGGTACAGGGGTCCTGAACAAACTGCATTGGGTAATTTGCTTTCATTGTGGCTTTTATGTGGCATATTTGCTGGGGTTGCTCTTGCTTGAATCAAATTTCTAGTTACTTCTGGTAGCCACATAGCTGCAGCTACTTGTGGCATAAACACTAGGAAGGAAGAAAAGGATATGCAGCTGGTAGTGGAGGTTATTAATGCTCATGATCTTATGCCCAAAGATGGTGAAGGATCAGCTAGTCCCTTTGTGGAAGTAGACCTTCAAAACCAGCTGAGTAGAACCAGAACTGTCCCAAAGAACCTCAACCCCACTTGGAACCAAAAATTATTCTTTCATTTAGATGCAACCAAACCTTACCATCACCAAACTATTGTAGTTTCAGTCTACAATGAGAGGAGACCTATTCCTGGCAGAAACTACCTTGGAAGCGTGAGGATTCCTTGCTCTAATATTGTCAAGGAAGGTGAGGAAGTGTATCAAATTTTCCCACTAGAAAAGAAGTGGTTTTTCTCATCTGTCAAGGGTGAGATTGGCCTAAAAATATACATTGCATCTGAGTCCAAACCAAAAGCCCTTTCTCCCACTTTCCCTCCAGATCCCACTTTCCCTCCAGAGATAGAAAAACTCTCACCTTCTACTCCACCACAATCACCAGAATCCACAACTAATAACCTTCCTCCTCTTCATAGCACTCCCTCAGTCACAGAAAATACAGGGCTAACCGACAGAACATTAGAAGCTGATTACAAAGGAGAAGGTCCTGCACTTAACACCCCAAAAGCAACCACAGAAGAAGCAGAAAAATTATATTCTGTTGCTGAATCAAATTTCTCAGCTGAAGAAGCTAAGTCTAGTGTCATTGATATTGATAAAGAGCCAAAGATAGAAAGCAAAGAACCTGTCATAGAGATAGCCCAACAACTAGACAAACACCAAGTTCTTCAGCAGCCAAGGATTTCAATAAAGAAACGACCACAAGATAATTCATTCACAATGCACTCAGTTGATCCTCGAGTCCAATCTAGCCATTATGAAAACTATGATCATAGGGACACCAACCTACAGCCAAGGATTTCAATTAAGAGAAGACCAAGAGCACATGGTACTCCATCAACAATGCACTCAGTTAATAATCCACAAGTCCATCCTAGCCATGATGAAAGGTACAATCTCAAGGGCACCACCAACCAACAGCCAAGGATTTTAGTAGAGACACAACCACAAGGTACTCCACTCACAATGCACCCGGTTATTCCCCAAGTCCATACTAGCAATGATGAAAACTACAAGCTCAAAGACACCAATCCACAGCTTGGTGAGAGGTGGCCTAGTGATGGTGGAAGAGGGTGGCTGAGTGGTAGTGAAAGATTCACAAGCACATATGACCTTGTTGAGCAGATGTTTTATCTGTATGTTCGTGTGGTGAAAGCAAAGGATCTTCCACCAGGCACCATCACCTCAAGCTGTGATCCTTATGTGGAAGTGAAGCTGGGGAACTATAGAGGAAGAACAAAGCACATGGAGAAGAAATTGAACCCGGAATGGAACCAAGTATTTGCTTTCTCCAAAGACAGCATTCAATCATCTGTTCTAGAAGTCTTTGTGAAAGACAAAGAAATGCTAGGGAGAGATGATTATCTTGGAAGGGTGGCCTTTGATCTCAATGAGGTTCCAACAAGAGTTCCACCAGATAGTCCACTGGCTCCCCAGTGGTACAGACTAGAGGACTTGAGAGGTGAAGGTAAGGTGAGGGGTGATATTATGCTTGCAGTTTGGATGGGAACACAAGCTGATGAAGCTTTCTCAGATGCTTGGCATTCTGATGCTGCCACTGTATATGGTGAGGGTGTTTTCAACATAAGATCAAAGGTTTATGTGTCTCCAAAACTGTGGTATCTAAGGGTCAATGTTATTGAAGCTCAAGATGTGATCCCAAGTGACAGAAACCGTTTACCAGAGGTTTTTGTGAAAGCTCAAGTGGGGTGCCAAGTACTGAGGACCAAAATATGTCCCACTAGAACAACTACTCCACTTTGGAATGAAGATTTGGTTTTTGTAGCAGCTGAACCATTTGAGGAGCAATTGACAATAACTGTGGAGGATCATGTGCACCCTTCAAAAGATGAGGTACTTGGTAACATGAGCTTACCTTTGACCCTATTTGAGAAGAGACTGGACCATAGGCCAGTTCATTCTCGCTGGTTCAACCTTGAGAAATTTGGTTTTGGAATGCTAGAAGGTGATAGGAGGAATGAGCTTAAATTTTCAAGCAGGATTCACCTGAGAGTTTCCCTTGAAGGTGGATACCATGTCCTAGATGAATCCACGTTGTACATTAGTGATCAAAGACCAACAGCAAGACAACTATGGAAGCAGCCTATTGGGATACTTGAACTAGGAATCTTAGGAGCAAAGGGTCTTCTCCCAATGAAGATGAAAGATGGACGTGGAAGCACAGATGCATACTGTGTTGCCAAATATGGTCAGAAATGGATCAGAACTAGAACACTTTTGGACACTTTTAGTCCCAAATGGAATGAACAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTAGGTGTTTTTGACAACTGCCATTTAGGTGGAGGTGAAAAAGCTCATGGTGGCAATGCAGCCAGAGATTCTGAGATTGGAAAGGTAAGGATTAGGTTATCAACACTTGAAGCTAACAGGATTTACACCAATTCTTACCCTCTTCTTGTTTTACACCCACATGGAGTTAAGAAGATGGGTGAGCTTCTACTAGCAGTGAGGTTTACTGCACTCTCACTAGTTAACATGGTTCATATTTATGGCCAACCTTTGCTTCCTAAGATGCATTATTTACATCCTTTCACAGTTAATCAAATAGACAATTTAAGGTACCAAGCCATGAACATTGTAGCTGTTAGGCTTGGCAGAGCTGAACCCCCTTTGAGGAAGGAAGTGGTGGAGTACATGTTGGATGTTGATTCACATATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTTCGCATCATGTCACTTTTTTCTGTTATGATCACAATGGGGAGATGGTTTAATGATGTCTGCCATTGGAAGAACAACATCACATCAATGCTAGTTCACATGCTCTTTCTGATACTTATATGTTACCCTGAATTGATACTACCAACTGTGTTTCTCTACATGTTCTTGATTGGTCTTTGGAACTATAGGTTCAGGCCTAGACACCCACCTCACATGGATACCAAACTCTCATGGGCAGAAGCTGTTTACCCAGATGAACTTGATGAAGAGTTTGACACATTCCCAACTTCTAGATCAAATGATGTAGTAAGAATGAGGTATGACAGGCTTAGAACTGTTGCAGGTAGGATTCAAACAATTGTTGGGGACATAGCTACACAAGGGGAGAGGTTTCAGTCTCTATTGAGTTGGAGAGACACCAGAGCAACCAGCATCTTTGTATTGTTTAGCTTTTGTGCAGCTGTGGTTCTCTATGTAACACCATTCAGAATGGTGGCTTTGGTAACAGGTTTGTATCATTTGAGACATCCAAGGTTTAGGAGCAAACTACCTTCTGTACCTAGTAATTTCTTCAAGAGGCTCCCAGCTAGAACTGATAGTTTACTGTGA 4623 0.422 MDLQSPQENVFASAEEEETTSLPPASYRRGAVSATTLLRVRMLRQCRLLGLPHLDLATSGKGGIGPYIGLCALSGCFGIAHAFVQGGVAGDLSFMCPEFIQSFIAGVNASGALASVLRLLTKVGFEKSDNGLRKGALLTFAISTFSELLCIILYAIYFPKLSIVKYYHSKAALEGSKTVSADVGATCVGNETNQQVEFHANQQDRLSNKQLFLQNIDYAAALFLTYVLSLSIMPGFLYEDTGSHQLGTWYPLVLILMYNIMDLISSYIPLIKCLKLESRKGLLIATLSRFLLVPAFYFTAKYGDQGWMILLVSFLGLTNGYLTVCVYTVVPKGYRGPEQTALGNLLSLWLLCGIFAGVALA*IKFLVTSGSHIAAATCGINTRKEEKDMQLVVEVINAHDLMPKDGEGSASPFVEVDLQNQLSRTRTVPKNLNPTWNQKLFFHLDATKPYHHQTIVVSVYNERRPIPGRNYLGSVRIPCSNIVKEGEEVYQIFPLEKKWFFSSVKGEIGLKIYIASESKPKALSPTFPPDPTFPPEIEKLSPSTPPQSPESTTNNLPPLHSTPSVTENTGLTDRTLEADYKGEGPALNTPKATTEEAEKLYSVAESNFSAEEAKSSVIDIDKEPKIESKEPVIEIAQQLDKHQVLQQPRISIKKRPQDNSFTMHSVDPRVQSSHYENYDHRDTNLQPRISIKRRPRAHGTPSTMHSVNNPQVHPSHDERYNLKGTTNQQPRILVETQPQGTPLTMHPVIPQVHTSNDENYKLKDTNPQLGERWPSDGGRGWLSGSERFTSTYDLVEQMFYLYVRVVKAKDLPPGTITSSCDPYVEVKLGNYRGRTKHMEKKLNPEWNQVFAFSKDSIQSSVLEVFVKDKEMLGRDDYLGRVAFDLNEVPTRVPPDSPLAPQWYRLEDLRGEGKVRGDIMLAVWMGTQADEAFSDAWHSDAATVYGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQVGCQVLRTKICPTRTTTPLWNEDLVFVAAEPFEEQLTITVEDHVHPSKDEVLGNMSLPLTLFEKRLDHRPVHSRWFNLEKFGFGMLEGDRRNELKFSSRIHLRVSLEGGYHVLDESTLYISDQRPTARQLWKQPIGILELGILGAKGLLPMKMKDGRGSTDAYCVAKYGQKWIRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKAHGGNAARDSEIGKVRIRLSTLEANRIYTNSYPLLVLHPHGVKKMGELLLAVRFTALSLVNMVHIYGQPLLPKMHYLHPFTVNQIDNLRYQAMNIVAVRLGRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSVMITMGRWFNDVCHWKNNITSMLVHMLFLILICYPELILPTVFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVYPDELDEEFDTFPTSRSNDVVRMRYDRLRTVAGRIQTIVGDIATQGERFQSLLSWRDTRATSIFVLFSFCAAVVLYVTPFRMVALVTGLYHLRHPRFRSKLPSVPSNFFKRLPARTDSLL* 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02763 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 799 938 IPR035892 -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 1 20 - -
Rops3g02763 1539 ProSiteProfiles C2 domain profile. 942 1065 IPR000008 -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 523 541 - -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 757 776 - -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 520 569 - -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 693 716 - -
Rops3g02763 1539 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 389 1539 IPR047259 -
Rops3g02763 1539 Pfam C2 domain 389 493 IPR000008 -
Rops3g02763 1539 Pfam C2 domain 1125 1239 IPR000008 -
Rops3g02763 1539 Pfam C2 domain 799 902 IPR000008 -
Rops3g02763 1539 Pfam C2 domain 961 1067 IPR000008 -
Rops3g02763 1539 FunFam C2 domain-containing protein 1108 1263 - -
Rops3g02763 1539 Gene3D C2 domain 795 941 IPR035892 -
Rops3g02763 1539 Gene3D C2 domain 382 524 IPR035892 -
Rops3g02763 1539 ProSiteProfiles C2 domain profile. 371 492 IPR000008 -
Rops3g02763 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 961 1116 IPR035892 -
Rops3g02763 1539 ProSiteProfiles C2 domain profile. 781 902 IPR000008 -
Rops3g02763 1539 SMART C2_3c 1126 1236 IPR000008 -
Rops3g02763 1539 SMART C2_3c 962 1062 IPR000008 -
Rops3g02763 1539 SMART C2_3c 389 490 IPR000008 -
Rops3g02763 1539 SMART C2_3c 799 896 IPR000008 -
Rops3g02763 1539 Pfam Nucleoside transporter 79 362 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g02763 1539 SUPERFAMILY MFS general substrate transporter 66 378 IPR036259 -
Rops3g02763 1539 ProSiteProfiles C2 domain profile. 1103 1237 IPR000008 -
Rops3g02763 1539 CDD C2B_MCTP_PRT_plant 799 925 IPR047257 -
Rops3g02763 1539 CDD C2A_MCTP_PRT_plant 390 515 - -
Rops3g02763 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 389 520 IPR035892 -
Rops3g02763 1539 Gene3D C2 domain 1106 1263 IPR035892 -
Rops3g02763 1539 Gene3D C2 domain 949 1095 IPR035892 -
Rops3g02763 1539 CDD C2D_MCTP_PRT_plant 1126 1256 IPR047255 -
Rops3g02763 1539 CDD C2C_MCTP_PRT_plant 962 1114 IPR047258 -
Rops3g02763 1539 FunFam C2 domain-containing protein 948 1095 - -
Rops3g02763 1539 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1125 1261 IPR035892 -
Rops3g02763 1539 Pfam Plant phosphoribosyltransferase C-terminal 1384 1539 IPR013583 -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 542 569 - -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 1 25 - -
Rops3g02763 1539 MobiDBLite consensus disorder prediction 700 716 - -
Rops3g02763 1539 FunFam C2 domain-containing protein 794 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02763 Rops-Chr3 58864234 58880982 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02763 3 58864234 58880982 Rops3g02763 3 58864234 58880982 ECH