Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02716 ATGGATGAAAATGGTAGTTCCAACAAACCCAACAACAAGTGGAAAATGCCCCTCTTTGTTTTCTTCAAAGATTCAAGACTTGTTTTCAAGCTGGATGCTCTTTCTAAGGAGATACTTGGGATTGCACTCCCTTCTGCACTCGCTGTTGCTGCTGATCCCATTGCTTCTCTGATAGACACAGCATTCATAGGCCACTTGGGACCTGTGGAACTTGCTGCTGCAGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGGATTACCATATTCCCTCTGGTCAGTATTACAACTTCCTTTGTGGCTGAGGAAGATACTCTTGAAAAGCTGAATACCAAAGCAGTAGAAAACAAGTTGATAGAAAATGATAAGGCTAACTTCAGCCAAGTAATGCATGAGGATCATAATATGCTTCAAGACATAGAAAAAGGCACACCCAAAGAGAATACTGAGACTCCAAATGATCTTGTAGCTAATAGTTTTGCACCTGAGGATGTGGAAAAACATGTGACTAGGAACAATGATACAAATAATGGAGATGATGCCAATACAAATACATGCAAGTCTTCCTCAGTTACTAGCAGTAATAAGGGTAAGGACAAAGTTGGAAATAAGAAGAGACACATTGCTTCAGCATCAACAGCACTACTTTTTGGCACAGTCCTTGGACTCATTCAAACTGCAATCCTTATCTTTGCAGCCAAACCTTTATTAGGTGTGATGGGTCTGAAACATGATTCTCCTATGCTAAAACCAGCAGAGAAGTATTTAAAATTGAGATCATTCGGTGCTCCTGCGGTTCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGGTTCAAGGACACAACAACTCCTTTATATGTCATAGTTTCGGGATATGCATTGAATGTGGTATTGGACCCAATACTTATATTTACATTGAAATGGGGCATCATAGGTGCAGCCATTGCACATGTTATCTCCCAGTACCTGATGGCATTCACCCTCTTGTTGATATTAATGAAAAAAGTGCATCTCCTACCTCCAAGCATCAAGGATTTGCAGATTTTCCGGTTTCTTAAAAATGGAGGTCTGTTGATGGCAAGGGTAATAGCAGTGACATTCTGTGTGACTTTGGCAGCATCATTGGCAGCAAGGCTAGGTTCAATTCCCATGGCTGCATTTCAAACTTGCCTACAGGTCTGGTTGACATCATCCCTTCTTGCAGATGGTTTGGCCGTTGCGGTTCAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGACTACAACAAGACAACAGCTGCTGCAACACGAACACTACAAATGAGTTTTGTCTTAGGAATTGGACTCTCTCTTGCTGTTGGAGTTGGATTATACTTTGGAGGTGGAATATTTTCCAAAAACATTCAAGTTGTGCACTTGATCAAAATAGGCCTCCCGGTCTTGGTATCATTAGTAAGTGTTGCTATAGAATTCCTTCTCTATAGGAGCAAACATTTCATTGGGATATGGATTGCACTAACCATCTACATGACTCTTCGTATGTTGGCTGGTGTATGGAGGATGGCAACAGGAACAGGACCTTGGCGCTATCTTAGAGGCCACTCATTGCCTTAG 1596 0.4185 MDENGSSNKPNNKWKMPLFVFFKDSRLVFKLDALSKEILGIALPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTLEKLNTKAVENKLIENDKANFSQVMHEDHNMLQDIEKGTPKENTETPNDLVANSFAPEDVEKHVTRNNDTNNGDDANTNTCKSSSVTSSNKGKDKVGNKKRHIASASTALLFGTVLGLIQTAILIFAAKPLLGVMGLKHDSPMLKPAEKYLKLRSFGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYALNVVLDPILIFTLKWGIIGAAIAHVISQYLMAFTLLLILMKKVHLLPPSIKDLQIFRFLKNGGLLMARVIAVTFCVTLAASLAARLGSIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYNKTTAAATRTLQMSFVLGIGLSLAVGVGLYFGGGIFSKNIQVVHLIKIGLPVLVSLVSVAIEFLLYRSKHFIGIWIALTIYMTLRMLAGVWRMATGTGPWRYLRGHSLP* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02716 531 CDD MATE_DinF_like 36 517 IPR044644 -
Rops3g02716 531 MobiDBLite consensus disorder prediction 142 204 - -
Rops3g02716 531 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 5 476 IPR044644 -
Rops3g02716 531 Pfam MatE 203 302 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Rops3g02716 531 MobiDBLite consensus disorder prediction 175 197 - -
Rops3g02716 531 NCBIfam MATE family efflux transporter 44 487 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02716 Rops-Chr3 57571285 57576748 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00816 7 10869414 10874642 Rops3g02716 3 57571285 57576748 ECH
Rops3g02716 3 57571285 57576748 Rops3g02716 3 57571285 57576748 ECH