Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02714 ATGGAGTCACAAGGGGAAGCTGGGGCAAAGCCAATGAAAACATTGGGTGGCCAAGTGTGCCAGATCTGTAGTGATAATGTTGGGAAGACTGTGGATGGTGAACCATTCGTTGCATGCGATGTTTGTGCTTTCCCTGTGTGCAGGCCTTGCTATGAGTATGAAAGAAAAGATGGGAATCAGTCTTGCCCTCAATGCAAAACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTCGGAGACCAGGAAGAGGATGGTGGTGCTGATGATGGTGCCAGTGACTTCAATTATGATTCAGAAAATCAAAACCAAAAGCAGAAGATTTCGGAGCGCATGTTGGGGTGGCAATTGGCATATGGGCGATCAGAGGAAGTTGGTGCTCCAAATTATGATAAGGAAGTTTCTCACAACCATATTCCTCTGCTGACAAGTGGACAAGAGGTCTCTGGAGAGTTATCTGCAGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGCGGGAAGCGTGTTCATAATCTTCCATATTCATCTGATGTTAATCAATCTCCAAATCCAGGATTGGGTAATGTAGCATGGAAAGAAAGAGTCGATGGCTGGAAGATGAAGCAAGAAAAGAATGTAGTTCCGATGAGCACAGGCCAAGCTGCTTCTGAAAGGGGAGCCGGAGATATTGATGCTACTACTGACGTGCTTGTGGATGATTCTTTGTTGAATGATGAAGCTCGACAACCTCTTTCCAGGAAGGTTTCTATTCCATCATCTAGGATAAATCCATATCGCATGGTCATTGTTCTGCGGCTGGTTATCCTTTGCTTTTTCCTGCATTATCGAATCACAAATCCAGTGCCCAATGCATATGCATTGTGGTTGGTATCGGTTATATGTGAGATTTGGTTTGCCATGTCTTGGATATTGGATCAATTCCCTAAATGGCTTCCGGTAAACCGTGAAACATATCTTGACAGGCTTGCACTGAGATATGATCGAGAAGGAGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTCGACCCGTTAAAGGAGCCCCCACTTGTGACTGCCAATACTGTACTATCTATTCTTGCCGTTGACTACCCTGTGGATAAGGTCTCCTGCTATCTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTTGCTGAGACATCAGAATTTGCAAGGAAGTGGGTTCCTTTCTGCAAGAAGTACACAATCGAACCCCGTGCACCTGAGTGGTACTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCTTCCATCCTTTGTCAAGGATCGTAGAGCGATGAAGAGAGAATATGAAGAATTTAAAATTCGTATTAATGGACTTGTTGCAAAGGCAACGAAAGTTCCTGAAGAAGGGTGGGTGATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATTCAGGTTTTCTTAGGCCAAAGTGGAGGACTTGACTCTGATGGCAACGAACTTCCTCGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCACTTGTTCGAGTATCTGCTGTCCTTACTAATGGACCTTTCTTGTTGAATCTCGATTGTGATCACTACATAAACAACAGCAAGGCTTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTCAATAGGACAGCTTTGTATGGTTATGAACCTCCGATTAAACCGAAGCATAAAAAGCCTGGGTTGCTATCATCACTCTGCGGTGGAAATCGGAAGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGCATGTTGACCCAACTGTGCCCATCTTCAGTCTAGAGGATATAGAAGAAGGCGTAGAAGGTACTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAATCTGCTGTTTTTGTTGCCTCTACACTTATGGAGAATGGCGGTGTTCCTCAGTCTGCTACTCCGGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAGACAGAATGGGGAACAGAGATAGGATGGATTTATGGTTCTGTGACAGAAGATATTCTTACTGGATTTAAGATGCATGCTCGTGGTTGGCGGTCCATATACTGCATGCCTAAGCTCCCAGCATTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCAGTCGAAATTCTTCTAAGCCGACATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTTGAAAGGTTTGCATATGTAAACACCACAATCTATCCAATCACTGCCATTCCCCTTCTCATGTATTGTACATTGCCTGCTGTCTGTCTGCTGACCAACAAGTTCATTATTCCACAGATCAGTAACATTGCAAGTATATGGTTCATTTCTCTCTTTTTGTCCATCTTTGCAACTGGAATCCTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGAGAAATGAACAATTTTGGGTCATTGGTGGTGTGTCAGCACATCTTTTTGCTGTGTTCCAAGGTATACTCAAAGTGCTTGCTGGAATTGACACCAACTTCACTGTCACCTCAAAGGCATCAGATGAAGATGGAGACTTTGCTGAACTCTACTTGTTTAAATGGACAACCCTTCTCATTCCACCAACAACCCTTCTCATAATAAACTTGGTTGGTGTTGTTGCTGGTATTTCTTATGCCATTAACAGTGGTTACCAATCATGGGGTCCCCTCTTTGGTAAACTTTTCTTTGCATTTTGGGTTATCATTCATCTTTACCCTTTCCTCAAAGGTCTCATGGGGCGCCAAAATAGAACACCAACCATTGTGGTGGTTTGGTCCATTCTACTTGCATCCATTTTCTCACTGTTATGGGTCAGAATTGATCCATTTACCACAAGAGTTACTGGTCCTAAAGTTGAGGAGTGTGGAATTAACTGCTAG 3210 0.4336 MESQGEAGAKPMKTLGGQVCQICSDNVGKTVDGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDQEEDGGADDGASDFNYDSENQNQKQKISERMLGWQLAYGRSEEVGAPNYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGKRVHNLPYSSDVNQSPNPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDATTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVPNAYALWLVSVICEIWFAMSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYLSDDGAAMLTFEALAETSEFARKWVPFCKKYTIEPRAPEWYFAQKIDYLKDKVLPSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGLLSSLCGGNRKKSSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKVEECGINC* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02714 1069 SUPERFAMILY RING/U-box 5 87 - -
Rops3g02714 1069 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 244 1036 - -
Rops3g02714 1069 MobiDBLite consensus disorder prediction 641 673 - -
Rops3g02714 1069 SUPERFAMILY Nucleotide-diphospho-sugar transferases 355 881 IPR029044 -
Rops3g02714 1069 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 487 632 IPR029044 -
Rops3g02714 1069 FunFam Cellulose synthase 3 94 - -
Rops3g02714 1069 CDD mRING-HC-C4C4_CesA 18 68 - -
Rops3g02714 1069 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Rops3g02714 1069 FunFam Cellulose synthase 458 632 - -
Rops3g02714 1069 Pfam Cellulose synthase 341 1062 IPR005150 GO:0016020|GO:0016760|GO:0030244
Rops3g02714 1069 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Rops3g02714 1069 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Rops3g02714 1069 MobiDBLite consensus disorder prediction 73 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02714 Rops-Chr3 57501023 57509656 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02714 3 57501023 57509656 Rops7g02538 7 47307158 47315908 PCT