Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02709 ATGTACATCAAGGAAATTTGCTTGGAAGGTTTCAAATCCTACGCGACCCGAACTGTTGTTCCGGGTTTCGATCCTTTCTTCAACGCCATCACAGGGTTAAACGGTTCTGGCAAATCGAACATTCTAGATTCGATTTGCTTTGTGCTTGGAATCACCAACTTGCAACAGGTTCGTGCTTCGAATCTTCAGGAACTTGTGTATAAGCAAGGGCAAGCTGGAATTACGAAAGCTACGGTTTCGATTGTGTTTGATAATTCTGATAGGAATCGAAGCCCTCTTGGATATGAAGACCATTCAGAGATTACAGTAACAAGACAGATTGTGGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCACAGCCTAGTCAAGTCCAGAACCTTTTCCATTCGGTACAACTAAATGTTAATAATCCACATTTCCTCATAATGCAAGGGCGCATTACTAAGGTTTTAAATATGAAACCACCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACTAGAATGTATGAGACAAAAAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGTAAGGTTGATGAGATTAACAACCTTCTTGATCAGGAGATACTGCCTGCTCTGGAGAAGTTAAGGAAAGAAAGGACACAGTACATGCAATGGGCAAATGGCAATGCTGAGTTAGATAGGTTGAGAAGATTTTGTATTGCTTATGAGTATGTTCAAGCAGAGAGGATTAAAGACAATGCTACTTCTGAGGTGGAACAAGTAAAAGCCAAGATAGCTGACATTGATGACATGGCTAAGGCAACTCAGGTGGAAGTAAAAGAAATGGAGAACAAAATAGCTCAGTTGACTGCTGAAAAGGAAGCAAGTATGGGTGGAGAAGTGAAATCTTTGTCAGAGAAGGTAGATGCACTTTCCCAGAATCTGGTGAGGGAGACGTCGGTATTGAATAATAAAGAAGACACTCTGAGGAGTGAAGAAGCCAACAAAGAAAAAATTGTTAAAAATATTGAAGAATTGAAGCAATCTGTGGAAGAGAAGGCCTCTGCTGTTAAAAGGGCTGAAGAAGGAGCAGCTGATCTGAAAAATAGAGTTGACGAGCTCACAAAGAGTCTGGAGGAGCATGAAAAGGAATACCAGGGCGTTTTAGCTGGAAAGAGCAGCGGTAATGAGGAGAAATGCTTAGAGGATCAACTAAGTGATGCAAAGATAGCAGTTGGGAGTGCTGAAACAGAACTGAAACAGCTGAAAACCAAAATTAGCCATTGTGAAAAGGAATTGAAAGAGAAAACACATCAACTAAAGTCAAAACGTGAAGAAGCTATTGCTGTAGAAAATGAGCTTAAAACTAGACGAAAAGATGTGGAAAATGTCAAAATGAAATTGGAGTCTCTTCCTTATAAAGAGGGTGAGATGGAAGCTTTGCAAAAGGAGCGTGAGACTGAGAAGGATTGTGTGCAAAAGTGTAAGGATGAAATACGCAACCTTTCAGCATACTTGGCAAATGTTGAATTTACATACCGTGATCCTGTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCAAAACTCATCAAAGTAAAGGATAGGTCCACAATGACTGCCCTAGAGGTTACAGCTGGTGGAAAGTTGTTTAATGTTGTTGTTGACACAGAAAATACTGGAAAGCAACTACTACAGAATGGTGATCTTAGAAGAAGAGCGACAATTATTCCTTTGAACAAAATACAATCCAATATTGTTCACCCCAGAGTTCAACAAGCTGCTGTTAGATTGGTGGGCAAGGAGAATGCGGAAGTTGCACTTTCTTTGGTTGGTTATGAAGAAGAATTAATGAGTGCAATGGAATATGTCTTTGGTTCAACCTTTGTTTGCAAAACCATTGATGCTGCAAAAGAGGTGGCATTTCATCGGGATATTCATACTACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGCAGTGGTGATCTTTTGAGGCAACTTCATGCTTTGGCCGAGGCAGAGTCAAAACTTTCAGTGCATCAAAAAAGGTTATCAGAGATTGAGGCAAAGATCACAGAGCTCCTTCCTCTTCAGAAAAAATTTAAAGACCTGAAAGCACAATTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCATAAGCTTGGAGAATTAGTGAAGAAGATTGAGCAAGAGCTTGAAGAAGCAAAATCTGTTGTCAAGGAAAAGCAAGTTTTATATGAGGATTGTGTCAAGACTGTTTCATCACTTGAGAAATCAATCAAAGAACATGCCAATAATCGAGAGGGTAGGCTAAAAGGCTTGGAGAAAAAGATAAAGTCAATCAAATCCCAAATGCAGTCATCTGTAAAAGATCTAAAGGGACATGATAATGAAAAGGAGAGGCTTGTAATGGAAATGGAAGCTGTTATCCAGGAGCAAGCATCCTTGGAGAATCAATTAGCGTCAATGAGCACACAGATTAGTAATCTTGCATCAGAAGTAGAAGAACAAAGATCCACGGTTGCTGCTGCAAGGAATAATCTTGATCAAGTTCAGTCACAGCTGAATTCAGTTCGCCAGAAAATGCAGGAATGTGACAAGGAAATCAATGGCATTATTAAAGAACAGCAAAAGCTTGAACATAAACTTAGTGAGAGTAATCTTGAAAGGAAAAGGATGGAAAATGAGGTAAAACGGATGGAGATGGAACAGAAAGACTGTTCTGTGAGGGTGGATAAATTGATAGAGAAGCATGCATGGATTGCTTCTGAAAAACAATTGTTTGGTAGAAGTGGAACTGATTATGATTTTTCTTCTCGTGATCCTGGTAAAGCAAGGGAGCAACTTGAGAAGCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTAATGACAATGTTTGAGAAGGCAGAAGATGAGTACAATGATCTGATGTCAAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATTGAAGAGCTAGATGAGAAGAAGAAAGAGACACTAAATGTTACCTGGATCAAAGTGAATAATGACTTTGGATCCATCTTTTCTACCCTATTACCGGGCACAATGGCTAAGTTAGAACCTCCAGAAGGATGCAGCTTTCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAACAGTCATTATCGGAACTGAGTGGAGGTCAGCGATCACTGCTTGCACTTTCTCTGATCCTGGCACTGCTTCTGTTCAAACCTGCTCCACTTTACATTTTGGACGAGGTTGATGCAGCTCTTGATTTGAGCCACACACAAAACATAGGGAGAATGATAAAGGCACACTTTCCACACTCTCAGTTTATAGTGGTTTCACTGAAGGAAGGCATGTTCAATAACGCAAATGTTCTTTTCCGGACAAAATTTGTGGATGGTGTTTCAACTGTTCAGCGAACTGTTGCAGCTAAACAAAAATGA 3528 0.4014 MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNSDRNRSPLGYEDHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINNLLDQEILPALEKLRKERTQYMQWANGNAELDRLRRFCIAYEYVQAERIKDNATSEVEQVKAKIADIDDMAKATQVEVKEMENKIAQLTAEKEASMGGEVKSLSEKVDALSQNLVRETSVLNNKEDTLRSEEANKEKIVKNIEELKQSVEEKASAVKRAEEGAADLKNRVDELTKSLEEHEKEYQGVLAGKSSGNEEKCLEDQLSDAKIAVGSAETELKQLKTKISHCEKELKEKTHQLKSKREEAIAVENELKTRRKDVENVKMKLESLPYKEGEMEALQKERETEKDCVQKCKDEIRNLSAYLANVEFTYRDPVKNFDRSKVKGVVAKLIKVKDRSTMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRATIIPLNKIQSNIVHPRVQQAAVRLVGKENAEVALSLVGYEEELMSAMEYVFGSTFVCKTIDAAKEVAFHRDIHTTSVTLEGDIFQPSGLLTGGSRKGSGDLLRQLHALAEAESKLSVHQKRLSEIEAKITELLPLQKKFKDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELEEAKSVVKEKQVLYEDCVKTVSSLEKSIKEHANNREGRLKGLEKKIKSIKSQMQSSVKDLKGHDNEKERLVMEMEAVIQEQASLENQLASMSTQISNLASEVEEQRSTVAAARNNLDQVQSQLNSVRQKMQECDKEINGIIKEQQKLEHKLSESNLERKRMENEVKRMEMEQKDCSVRVDKLIEKHAWIASEKQLFGRSGTDYDFSSRDPGKAREQLEKLQAEQSGLEKRVNKKVMTMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWIKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKQK* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02709 1175 Coils Coil 736 763 - -
Rops3g02709 1175 Coils Coil 400 448 - -
Rops3g02709 1175 Coils Coil 178 198 - -
Rops3g02709 1175 FunFam Structural maintenance of chromosomes 2 995 1174 - -
Rops3g02709 1175 Gene3D - 994 1174 IPR027417 -
Rops3g02709 1175 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Rops3g02709 1175 Coils Coil 989 1026 - -
Rops3g02709 1175 SUPERFAMILY Smc hinge domain 480 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Rops3g02709 1175 Gene3D - 1 202 IPR027417 -
Rops3g02709 1175 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Rops3g02709 1175 Coils Coil 239 287 - -
Rops3g02709 1175 Coils Coil 782 928 - -
Rops3g02709 1175 Gene3D - 590 666 - -
Rops3g02709 1175 Gene3D - 805 891 - -
Rops3g02709 1175 Pfam RecF/RecN/SMC N terminal domain 2 1161 IPR003395 -
Rops3g02709 1175 Gene3D - 425 589 - -
Rops3g02709 1175 Coils Coil 473 493 - -
Rops3g02709 1175 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1173 - -
Rops3g02709 1175 PIRSF SMC 1 1155 IPR024704 GO:0005524|GO:0016887
Rops3g02709 1175 FunFam Structural maintenance of chromosomes 2 1 202 - -
Rops3g02709 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1157 IPR027417 -
Rops3g02709 1175 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Rops3g02709 1175 Coils Coil 679 699 - -
Rops3g02709 1175 FunFam Structural maintenance of chromosomes 2 518 584 - -
Rops3g02709 1175 Coils Coil 317 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02709 Rops-Chr3 57411602 57421874 Dispersed