Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02701 ATGGCTTCTTCTTCAGTTATTAAGGATGCGAAAGTGCTCATGGTTGGTGCCGGTGGAATTGGCTGCGAGCTTCTCAAGACGCTCGCTCTTTCTGGTTTCTCTGACATACACATCATTGACATGGACACTATAGAAGTCAGTAACCTGAACAGACAATTTTTGTTTCGACAATTCCATGTTGGGCAGTCCAAGGCTAAAGTTGCTAGGGACGCTGTGTTAAGATTTAGGCCCCACATAAACATTACATCATACCACGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAATGTTGTTCTAAATGGACTTGACAACCTAGATGCACGCCGACATGTGAATCGCTTATGCTTGGCAGCTGATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGTCAGGTTACTGTACATATCAAGGGAAGAACGGAGTGCTATGAGTGTCAGCCTAAACCAGCTCCCAAGACATATCCTGTTTGTACTATCACAAGTACACCATCTAAGTTTGTTCACTGTATTGTGTGGGCAAAGGACCTACTTTTTACGAAGTTATTTGGGGACAAGAATCAGGAAAATGATTTAAATGTTCGCTCAAGTGATGCTGCCAGCTCATCAGAAAATGTAGAGGATGTATTTGAACGTAGGAAAGATGAGGACATTGATCAATATGGCAGGAAAATATTTGATCATGTATTTGGGTATAATATTGAATTAGCTTTGTCTAATGAAGAGACATGGAAAAATCGGAATAGACCAAAACCTATATACAGCAAGGATGTCCTGTCTGATGAACTGGCTCAACAGAATGGGAATTTGGACAAAAGTAATGAATCTGATGATGGATTATCAGTTTCTGCCATGGCATCTTTGGGCATGAGGAACCCACAGGATATCTGGAGTCTTAGAGAAAATTCTAGAATATTTCTTGAAGCACTGAGACTATTTTTCACGAAAAGGGAAAAGGAGATTGGCAATCTGAGCTTTGATAAAGATGACCAGTTGGCTGTAGAATTTGTTACTGCGGCTGCAAACATACGGGCTGCTTCATTTGGCATCCCTCTTCACAGCCTTTTTGAAGCTAAAGGAATCGCTGGTAATATTGTGCATGCTGTTGCAACAACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATTAAAGTGCTGCAAAATGATGTTAGAAGTTATAGAATGACATATTGTCTGGAACATCCATCAAGAAAGATGCTGCTTATGCCAGTGGAGCCATTTGAACCTAACAAATCTTGTTATGTTTGTTCTGAGACTCCTTTATCGCTTGAAATAAACACAAACCATTCGAAGTTAAAGGACATCGTTGAAAAGATTGTCAAGGCAAAGCTTGGGATGAGCCTTCCAATTATTATGAATGCTTCAAATCTCCTTTATGAAGCTGGTGATGTTGAGGAAGACATGGTTGCCATTTATGCAGCCAACCTTGAAAAGGTCCTAGCTGAGCTTCCTTCTCCAGTAACTGGTGGTACAATGGTTACAGTAGAGGATCTTCAACAGGAATTCACTTGCAATATTAACATAAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCCGATGGGATGGTTCTCTCAGGATGGACTCAACCAGTGCCAGCAGCAGAAAATAAAGACAAGTCTGTTGGTAATGGTGCAAGCATCTCAGATGCAACAATAACAGCTGTAGAATCTGAAAACAATGAGATAGGCGTAGTTTCTCCCATGAAGAGAAGAAAAATTACTGATGATTCCAATATGTCAAATGCTGCTGATGAAGCAATGCATCGCAAGCAATTGCAAGTACTTGATGATGAAGATGATCTTGTTGAGCTTGATGGGAATTTAGACTGCTTTAAAAAGAGAAGATTGTCATAG 1905 0.4021 MASSSVIKDAKVLMVGAGGIGCELLKTLALSGFSDIHIIDMDTIEVSNLNRQFLFRQFHVGQSKAKVARDAVLRFRPHINITSYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHIKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFTKLFGDKNQENDLNVRSSDAASSSENVEDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELAQQNGNLDKSNESDDGLSVSAMASLGMRNPQDIWSLRENSRIFLEALRLFFTKREKEIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDVRSYRMTYCLEHPSRKMLLMPVEPFEPNKSCYVCSETPLSLEINTNHSKLKDIVEKIVKAKLGMSLPIIMNASNLLYEAGDVEEDMVAIYAANLEKVLAELPSPVTGGTMVTVEDLQQEFTCNINIKHREEFDEEKEPDGMVLSGWTQPVPAAENKDKSVGNGASISDATITAVESENNEIGVVSPMKRRKITDDSNMSNAADEAMHRKQLQVLDDEDDLVELDGNLDCFKKRRLS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02701 634 FunFam SUMO-activating enzyme subunit 2 1 105 - -
Rops3g02701 634 FunFam SUMO-activating enzyme subunit 160 371 - -
Rops3g02701 634 FunFam SUMO-activating enzyme subunit 374 407 - -
Rops3g02701 634 FunFam SUMO-activating enzyme subunit 433 579 - -
Rops3g02701 634 PIRSF SUMO_E1B 3 619 IPR030661 GO:0016925|GO:0019948
Rops3g02701 634 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 7 483 IPR045886 -
Rops3g02701 634 CDD Uba2_SUMO 11 432 - -
Rops3g02701 634 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 481 IPR035985 GO:0008641
Rops3g02701 634 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 160 371 IPR023318 -
Rops3g02701 634 Gene3D - 2 105 IPR042449 -
Rops3g02701 634 Pfam ThiF family 7 430 IPR000594 -
Rops3g02701 634 FunFam SUMO-activating enzyme subunit 2 6 182 - -
Rops3g02701 634 Pfam Ubiquitin-activating enzyme, SCCH domain 313 366 IPR019572 -
Rops3g02701 634 Gene3D - 433 622 - -
Rops3g02701 634 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 439 530 IPR028077 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02701 Rops-Chr3 57282946 57289856 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02701 3 57282946 57289856 Rops3g02701 3 57282946 57289856 ECH