Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02688 ATGGCATTGAATCAAGAGTTAGCAGCTGTTACCCAAGCTCTTTCAGGGCATGGTGTTGATGAGCAATCATTGATAAAGTTACTGGGAAAATGGGATCCTTTGGAGAGAGAATCTTTCAGGAAGAAGACACCAAATTTCTTCCATGAGGATCATGAACGCAATTTTCAGAGGTGGGATGATCACTGTGTCCGTTTTCTCAAGCATGAGTTCGTGCGTTTTAAGAATGCTGTGGTGCTTTGGAGCATGCACCCTTGGGAAAGAGATGCCCGTTTGACAAAAGAGGCCCTTAAGAAGGGCCCACAAGCATATGGAGTGTTGATTGAGATTGCATGCACCAGATCCTCAGAAGAGCTTTTGGGAGCTAGGAAGGCCTACCATTCCCTCTTTGATCACTCCATTGAGGAAGATGTTGCTTCTCACATCCATGGCATTGAAAGAAAGCTCTTGGTTGCACTTGTGAGTGCCTATAGATATGAAGGGTCAAAGGTTAAAGATGACACTGCAAAATCAGAGGCCAAAACACTTGCTAATGCGATTAAGAATGCTAATAAGAAGCCTATTATTGAGGATGATGAAGTAATAAGGATATTGGCAACAAGAAGCAAGCTACATCTCCAAGCAATTTACAAGCACTATAAAGAGATATCTGGCAAGAACCTTGACGAGGATCTTGATGACTTAAGATTGAAAGAGACTGTGCAATGCCTTTGCACCCCACAAATATATTTTAGCCAGGTTTTGAATGCAACTTTGAGAATTGATGTGGATAAGAATACTAAGAAAGCACTTACTCGTGTGGTTGTTACTCGAGCTGACATTGATATGAAGGAGATAAAAGCTGAGTACCATAACCTGTATGGTGTTTTTTTACCCCAGAAAATTGAAGAGATAACTAAAGGGAACTACAAGGATTTCTTGCTAACTTTGATTGCAAGAGGAGGCTAA 945 0.4127 MALNQELAAVTQALSGHGVDEQSLIKLLGKWDPLERESFRKKTPNFFHEDHERNFQRWDDHCVRFLKHEFVRFKNAVVLWSMHPWERDARLTKEALKKGPQAYGVLIEIACTRSSEELLGARKAYHSLFDHSIEEDVASHIHGIERKLLVALVSAYRYEGSKVKDDTAKSEAKTLANAIKNANKKPIIEDDEVIRILATRSKLHLQAIYKHYKEISGKNLDEDLDDLRLKETVQCLCTPQIYFSQVLNATLRIDVDKNTKKALTRVVVTRADIDMKEIKAEYHNLYGVFLPQKIEEITKGNYKDFLLTLIARGG* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02688 314 FunFam annexin D4 153 240 - -
Rops3g02688 314 SMART annex3 189 236 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 SMART annex3 103 152 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 PRINTS Annexin family signature 178 204 IPR001464 GO:0005509|GO:0005544
Rops3g02688 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Rops3g02688 314 PRINTS Annexin family signature 15 37 IPR001464 GO:0005509|GO:0005544
Rops3g02688 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Rops3g02688 314 SUPERFAMILY Annexin 7 311 IPR037104 GO:0005509|GO:0005544
Rops3g02688 314 Gene3D Annexin 242 311 IPR037104 GO:0005509|GO:0005544
Rops3g02688 314 ProSiteProfiles Annexin repeat profile. 166 252 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 PANTHER ANNEXIN 7 309 - -
Rops3g02688 314 Gene3D Annexin 152 241 IPR037104 GO:0005509|GO:0005544
Rops3g02688 314 Gene3D Annexin 83 151 IPR037104 GO:0005509|GO:0005544
Rops3g02688 314 FunFam Annexin 83 152 - -
Rops3g02688 314 Pfam Annexin 260 309 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 Pfam Annexin 175 225 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Rops3g02688 314 FunFam annexin D4 241 311 - -
Rops3g02688 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02688 Rops-Chr3 57083298 57087065 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02688 3 57083298 57087065 Rops3g02688 3 57083298 57087065 ECH