Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02684 ATGGCTACCCTTGTTGCTCCCAGCAATCATTCTCCCATGGAAGATGCAGAAACTCTCAGGAAGGCTGTCAAAGGATGGGGGACTGACGAGAAGACCATCATAGCAATATTGGGTCATAGAAATGCTTCTCAAAGACAGCAAATCAGACAAGCTTACCAGGACCTTTACCAAGAGGATCTCATCAAACGCCTTGAATCTGAGATCTCTGGAGACTTTGAGAAAGCTATGTACAGATGGATACTGGAACCTGCAGAACGTTATGCTGTGTTGGCCAATGTAGCCATCAAGAATGCTAAGAAAGACTACCATGTGATTGTGGAAACTGCATGTGTGCTTCAACCTGAAGAGCTTTTGGTTGTGAGGAGTGCCTACCATAACCGCTACAAGCATTCATTGGAAGAAGATGTGGCTGCTCATACCACTGGCCATCTTCGCCAGCTTTTGGTTGGATTGGTGAGTTCATTTAGATATGGTGGTGATGAGATCAATGCAAGATTGGCAAAATCTGAAGCTGATATTCTTCATGAGGCTCTCAAAAAAGACAAGAAAGGTGACCATGAAGAAGTTATTAGGATCCTTAGTACAAGGAGCAAGACCCAACTTGTGGCTACTTTCAACAGATACAGAGATGAACATGGCACTTCCATCAGCAAGAAACTGTTGGATGATGCCTCTGATGACTTCCTTAAGGCTGTGCATGTTGCCATTCGCTGCATCAATGACCCGAAGAAGTACTATGAAAAGGTTCTGCGGAATGCAATGAAAAGGATTGGAACTGATGAGGATGGACTAACTCGTGTGATTGTCAGCAGAGCTGAGAAGGACTTGAAGGACATCAAAGAGCTGTATTACAAGAAAAACAGTATTCACCTTGAGGATGCAGTGGCCAAGGAAATCTCAGGAGATTACAAGAGGCTCCTCCTCACTCTACTGGGGAAAGAAGAATAA 948 0.442 MATLVAPSNHSPMEDAETLRKAVKGWGTDEKTIIAILGHRNASQRQQIRQAYQDLYQEDLIKRLESEISGDFEKAMYRWILEPAERYAVLANVAIKNAKKDYHVIVETACVLQPEELLVVRSAYHNRYKHSLEEDVAAHTTGHLRQLLVGLVSSFRYGGDEINARLAKSEADILHEALKKDKKGDHEEVIRILSTRSKTQLVATFNRYRDEHGTSISKKLLDDASDDFLKAVHVAIRCINDPKKYYEKVLRNAMKRIGTDEDGLTRVIVSRAEKDLKDIKELYYKKNSIHLEDAVAKEISGDYKRLLLTLLGKEE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02684 315 Gene3D Annexin 165 240 IPR037104 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Rops3g02684 315 FunFam Annexin 241 313 - -
Rops3g02684 315 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 PANTHER ANNEXIN 12 310 - -
Rops3g02684 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 Gene3D Annexin 241 315 IPR037104 GO:0005509|GO:0005544
Rops3g02684 315 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Rops3g02684 315 FunFam Annexin 82 152 - -
Rops3g02684 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 SMART annex3 183 236 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 FunFam Annexin 1 81 - -
Rops3g02684 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Rops3g02684 315 PRINTS Plant annexin signature 160 180 IPR009118 -
Rops3g02684 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Rops3g02684 315 Pfam Annexin 92 151 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 Pfam Annexin 170 233 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Rops3g02684 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Rops3g02684 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Rops3g02684 315 SUPERFAMILY Annexin 3 314 IPR037104 GO:0005509|GO:0005544
Rops3g02684 315 FunFam Annexin 165 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02684 Rops-Chr3 57021927 57024933 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02684 3 57021927 57024933 Rops3g02684 3 57021927 57024933 ECH
Rops7g02359 7 42272946 42276117 Rops3g02684 3 57021927 57024933 PCT