Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02665 ATGGAGTCTCTAGTTCTTCAACTCCATGAAATTTCTGCTGTTAAATTTGGCAACTTCAAGCTCAAATCAGGCATTTCTTCACCAATCTATATAGACCTACGCCTTGCTACATCATACCCTTCTGTCCTTAGACAAATTTCTAAAACACTGATATCCTCTGTGTCTTCCACTTCATTTGACCTTGTCTGTGGTGTCCCTTACACTGCTCTTCCTATTGCCACTTGTGTATCTGTTACTCAGAACATCCCTATGGTAATGCGCCGCAAGGAAATCAAAGACTATGGAACTTCTAAAGCCATTGAAGGTGATTTCAGGCATGGCCAAAGTTGCTTGATAATTGAGGATCTAGTTACTAGTGGCACATCAGTTTTGGAAACTGCTGCGCCACTGCGTGCCACAGGGTTGAAGGTCAGTGATGCTGTTGTTTTGATTGATAGGGAGCAAGGTGGGAGGGAGAATTTGGAGAGTAATGGAATCAAGCTGCATGCTATTCTTAAATTGACTGAAATGGTGAAGATTTTGAGGCAAAAAGGAAAGCTTGATGAGGAGATGGTAGGGGTGGTTATGAGATTCTTAGAGGAAAATCAGAAGGTGGCTGCTTTGGCAACTACAACAAAGGTCAAGAAGGCCTTGTCATTTTTGGAGAGGGCTAAGTTGTCCAAGAATCCAACAGGAAGGAGGTTGTTTGAGATAATGGCTGAGAAGGAAAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATCGCTGACAAGGTTGGGCCTGAGATATGCTTGCTGAAAACTCATGTGGATATTTTTCCAGATTTTGCTCCTGATTTCGGTTCTAAGCTTCGCAAGATTGCAGAAGAACATAACTTTTTAATCTTTGAGGATCGTAAATTTGCTGACATTGGTAACACAGTCACCATGCAGTATGAGGGAGGGATCTTTCATATATTGGATTGGGCTGATATAGTAAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGACTGAAATTAAAGGGTTTGCCTCGTGGAAGGGGTCTGTTGTTGCTTGCTGAAATGAGTTCAGCAGGTAACCTTGCCAAGGGAGATTACACCACTGCTGCAGTGAAAATTGCTGAGGATCATTCTGACTTTGTTATTGGCTTCATCTCAGTCAATCCAGCATCATGGCCTGGGGCACCCATAAATCCCTGTTTCATTCATGCAACTCCTGGAGTTCAAATGATGACTGGTGGTGATGCTTTAGGGCAGCAATATAACACTCCATATTCTGTTATCCATGATAGGGGTAGTGACATTATCATAGTGGGCCGTGGCATCATCAATGCAGAAAATCCAGCTGTGGCAGCTCGTGAATACCGTCTTCAAGGATGGAGTGCATATTTGGCTAAGTGCAGTTAA 1410 0.4305 MESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLATSYPSVLRQISKTLISSVSSTSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTSKAIEGDFRHGQSCLIIEDLVTSGTSVLETAAPLRATGLKVSDAVVLIDREQGGRENLESNGIKLHAILKLTEMVKILRQKGKLDEEMVGVVMRFLEENQKVAALATTTKVKKALSFLERAKLSKNPTGRRLFEIMAEKESNLCLAADVGTAAELLEIADKVGPEICLLKTHVDIFPDFAPDFGSKLRKIAEEHNFLIFEDRKFADIGNTVTMQYEGGIFHILDWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTTAAVKIAEDHSDFVIGFISVNPASWPGAPINPCFIHATPGVQMMTGGDALGQQYNTPYSVIHDRGSDIIIVGRGIINAENPAVAAREYRLQGWSAYLAKCS* 470
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02665 469 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 237 456 IPR001754 GO:0004590|GO:0006207
Rops3g02665 469 Gene3D Aldolase class I 209 469 IPR013785 -
Rops3g02665 469 CDD PRTases_typeI 59 166 IPR000836 -
Rops3g02665 469 SUPERFAMILY PRTase-like 3 190 IPR029057 -
Rops3g02665 469 Pfam Phosphoribosyl transferase domain 49 152 IPR000836 -
Rops3g02665 469 SUPERFAMILY Ribulose-phoshate binding barrel 211 465 IPR011060 -
Rops3g02665 469 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 225 IPR023031 GO:0004588|GO:0006221
Rops3g02665 469 Gene3D - 1 208 IPR029057 -
Rops3g02665 469 FunFam Uridine monophosphate synthetase 208 469 - -
Rops3g02665 469 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 294 307 IPR018089 GO:0004590|GO:0006207
Rops3g02665 469 NCBIfam orotate phosphoribosyltransferase 8 169 IPR004467 GO:0004588
Rops3g02665 469 NCBIfam orotidine-5'-phosphate decarboxylase 239 457 IPR014732 GO:0004590|GO:0044205
Rops3g02665 469 CDD OMP_decarboxylase_like 239 456 - -
Rops3g02665 469 FunFam Uridine monophosphate synthetase 1 201 - -
Rops3g02665 469 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 468 - -
Rops3g02665 469 SMART OMPdecase_2 238 456 IPR001754 GO:0004590|GO:0006207
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g02665 Rops-Chr3 56647910 56653245 Dispersed/Wgd