Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02664 ATGTCTACACAGCATGAAAATTCTGATACAAGAGATGGACCAGATCCACATAAAAGGCTAAACAATCTGATGCATCAAGCTGGGAACAAGTTTTGTGCTGATTGTGGAACTCCAGAGCCAAAATGGGTATCTTCAAGTCTTGGAGTATTTATTTGCATCAAGTGTTCTGGAATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTGTATCATTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTAGAGATGTTGGGTGGAAATACATTATTAAATAAGAAGTATGAAGCTTGCCTCCCAAGTAATATAAAGAAACCAAAACCACATTCCTCCATTGAGGAGCGCTCCGATTATATAAGGAGAAAATATGAGATGCTACAATTCATGGAGTGTGATGACAATTTGTCATGTCAAATTATACCCAGTCCTCAAGGAAGAAGTTTGTCATTGGCTCATACCAGTTCTTCAATTTTCAATTCTTTCATGGAGAAGAAACAATATGAGAAAAATCCAACCAAACATCGTATTGGACATGCATTCCGAAATAGCTGGGGAAGAAAAGATTCTGTGCACAAGGCTTCAAAGAAGAGTAGCTCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTTGTAAAAGGCACTCACCTGGCAGTTAGAGATGTAATGACAAGTGACCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGTGTAATAAAGAACAATTTGAATCCAGTCTGGAATGAAAGCCTAATGCTATCAATTCCAGAGAACATTCCCCCTCTTAAAGTGCTTGTGTATGATAAGGATACATTTTCAACTGATGATTTTATGGGAGAGGCTGAAATAGACATTCAACCTCTAGTTTTAGCTGCAATTGCCTATGAGAAATCTACAATCAATGAGTCCATGCAGCTTGGGAAATTTGTAGCAAGCAAGGACAACACCCTTGTTAGAGATGGTGTCATCTCCCTTGATGAAGGGAAGATTAAACAGGAAATCTCAGTGAGGCTACAGAATGTTGAGAGAGGTGTGTTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAATAG 1104 0.3859 MSTQHENSDTRDGPDPHKRLNNLMHQAGNKFCADCGTPEPKWVSSSLGVFICIKCSGIHRSLGVHISKVVSLKLDEWTDEQVDALEMLGGNTLLNKKYEACLPSNIKKPKPHSSIEERSDYIRRKYEMLQFMECDDNLSCQIIPSPQGRSLSLAHTSSSIFNSFMEKKQYEKNPTKHRIGHAFRNSWGRKDSVHKASKKSSSLAGMVEFVGLIKVNVVKGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKNNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVLAAIAYEKSTINESMQLGKFVASKDNTLVRDGVISLDEGKIKQEISVRLQNVERGVLEIELECVPLTQ* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02664 367 CDD ArfGap 20 126 - -
Rops3g02664 367 CDD C2_ArfGAP 210 354 - -
Rops3g02664 367 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Rops3g02664 367 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Rops3g02664 367 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Rops3g02664 367 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 14 367 IPR044518 GO:0005096|GO:0005543
Rops3g02664 367 Gene3D C2 domain 210 366 IPR035892 -
Rops3g02664 367 ProSiteProfiles C2 domain profile. 194 309 IPR000008 -
Rops3g02664 367 SUPERFAMILY ArfGap/RecO-like zinc finger 18 132 IPR037278 -
Rops3g02664 367 SMART arf_gap_3 17 139 IPR001164 GO:0005096
Rops3g02664 367 FunFam stromal membrane-associated protein 1 isoform X1 2 137 - -
Rops3g02664 367 Pfam C2 domain 212 298 IPR000008 -
Rops3g02664 367 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 139 IPR001164 GO:0005096
Rops3g02664 367 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 209 367 - -
Rops3g02664 367 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 208 302 IPR035892 -
Rops3g02664 367 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Rops3g02664 367 SMART C2_3c 212 307 IPR000008 -
Rops3g02664 367 Gene3D Arf GTPase activating protein 1 139 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02664 Rops-Chr3 56621877 56632387 Dispersed/Wgd