Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02662 ATGATGTACAATGACCCTCATAACCCTCAGCACCAGCACCAGTTCCAACAGCAACAACAGCAGCAGCAACAGCATTTCCACCATCAGCAGCAACCAGGTCCTGAATTTCACCGTGGACCGCCGCCACCGCAGCAGCAACAGCCACCGCCAATGATGCGACAGCCTTCCGCTTCGTCCACGAACCTCGCACCGGAGTTTCACCACCCCGGAGGCCCACCTCCTCCTCATTACGATGTTCATGGTGATAGCCATGGTGCAAAAAGAATGAGAAAGCTAACTCAAAGGAAGGCAGTTGATTATACGAGCACAGTTGTGCGTTATATGCAGATTCGGATGTGGCAGCGGGATTCAAGAGATAGGACAGTACTGCAACCTACGCCAGCAGCAGCAATCGATATGTTGCCAGCAGTTGGCTATTCAGACAATCCATCCACAAGCTTTGCTGCCAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCTATTAATCGTGTTCTTTGGACTCCAACAGGCCGGCGTCTTATTACTGGCTCGCAGACTGGGGAATTCACTCTTTGGAATGGACAGTCTTTTAATTTTGAAATGATACTTCAGGCTCATGACCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGATCTCTGGCGATGACGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCTAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGTTCGTGCTCAGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGTTCATTAACTGGCCATGGGTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCTCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAAACAGGGAGAGAGCTTTGCTCATTCCATGGCCACAAAAATACTGTACTCTGTGTCAAATGGAATCAAAATGGCAACTGGGTATTAACAGCTTCAAAAGATCAAATAATAAAGCTTTATGACATAAGGTCAATGAAGGAGCTTGAATCATTCCGTGGACATCGGAAGGATGTTACTACTTTGGCTTGGCATCCATTCCATGAAGAGTACTTTGTTAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGCCATGAAACTCCACAAATTGAAATTTCCAATGCTCATGATAGTAATGTGTGGGATCTTGCATGGCATCCTATTGGATATCTTCTGTGCAGTGGTAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGCTCGTGATAGATTTAACACTGGCATGCAAGGATATGCTGAGCAAAATCCTGTTGCTGGTCGTGTGGGTGGTAATTTTGCAATACCTGACGGCCCAACAACTCCAGGACCATTTGCCCCTGGGTTGACTCGAAATGAGGGCACCATTCCAGGTGTTGGAGCTGCAATGCCCTTATCTATTCCTTCTCTTGATGTGTCTCAAGGGGAGCAGAAGCAGCCCCATCCTGTTTCAATGGGTGCTCCTCCTCTTCCCCCAGGTCCACATCCCTCTCTTCTTTCTGCCAATCAACAACAACCATTCCAACAGAATCCTCAGCAGATCCCACAACATCAACACCAGGCACTACCTCAACAGATGGGTCCTTTGCCTATGCCTCCAAATATGCCACAGCTACAGCACCCTTCCCATTCTCCTATGGTTCCTCACCAACATTTGCCTCGCCCTCCACCCCAAATGCCACTTGGAATGCCAGGATCTCTGCCAGTACCCACGTCACATCCAATGCCAATGCCAGGACCTATGGGGATGCAAGGTGCAATGAATCAGATGGGTACTCCAATGCCACAAGGGCATTTTGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCACCTCTTGGAGGTTTCCCAAGCAACTTGCCTAATATGCAAGGGCCATCAAATACCAATTATCCTCAAGGTGCTTCATTCAACAGACCTCAAGGTGGACAAATGCCTTTGATGCAAGGTTATAATCCTTACCAGTCTGGAAATCAATCTGGGATGCCTCCGAACGCGCAACCTGGAGCATCACACTCTCAAATGCCTCAATAG 2175 0.4685 MMYNDPHNPQHQHQFQQQQQQQQQHFHHQQQPGPEFHRGPPPPQQQQPPPMMRQPSASSTNLAPEFHHPGGPPPPHYDVHGDSHGAKRMRKLTQRKAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPAVGYSDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMISGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDSNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTARDRFNTGMQGYAEQNPVAGRVGGNFAIPDGPTTPGPFAPGLTRNEGTIPGVGAAMPLSIPSLDVSQGEQKQPHPVSMGAPPLPPGPHPSLLSANQQQPFQQNPQQIPQHQHQALPQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPLGMPGSLPVPTSHPMPMPGPMGMQGAMNQMGTPMPQGHFVGMNQMHSGSLPTSGGPPLGGFPSNLPNMQGPSNTNYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNAQPGASHSQMPQ* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02662 724 MobiDBLite consensus disorder prediction 35 50 - -
Rops3g02662 724 Pfam WD domain, G-beta repeat 241 272 IPR001680 GO:0005515
Rops3g02662 724 Pfam WD domain, G-beta repeat 319 356 IPR001680 GO:0005515
Rops3g02662 724 Pfam WD domain, G-beta repeat 362 398 IPR001680 GO:0005515
Rops3g02662 724 Pfam WD domain, G-beta repeat 280 314 IPR001680 GO:0005515
Rops3g02662 724 Pfam WD domain, G-beta repeat 196 229 IPR001680 GO:0005515
Rops3g02662 724 Pfam WD domain, G-beta repeat 412 441 IPR001680 GO:0005515
Rops3g02662 724 MobiDBLite consensus disorder prediction 667 724 - -
Rops3g02662 724 PANTHER WD40 REPEAT PROTEIN 78 714 IPR045245 GO:0031124
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 366 398 IPR001680 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 410 441 IPR001680 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 240 272 - -
Rops3g02662 724 Gene3D - 312 453 IPR015943 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 366 398 - -
Rops3g02662 724 FunFam Flowering time control protein FY 105 313 - -
Rops3g02662 724 PRINTS G protein beta WD-40 repeat signature 429 443 IPR020472 -
Rops3g02662 724 PRINTS G protein beta WD-40 repeat signature 301 315 IPR020472 -
Rops3g02662 724 PRINTS G protein beta WD-40 repeat signature 259 273 IPR020472 -
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 282 319 - -
Rops3g02662 724 MobiDBLite consensus disorder prediction 590 609 - -
Rops3g02662 724 MobiDBLite consensus disorder prediction 514 609 - -
Rops3g02662 724 MobiDBLite consensus disorder prediction 652 724 - -
Rops3g02662 724 SUPERFAMILY WD40 repeat-like 152 441 IPR036322 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 282 323 IPR001680 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 410 441 - -
Rops3g02662 724 FunFam Flowering time control protein FY 314 451 - -
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 359 - -
Rops3g02662 724 Gene3D - 152 311 IPR015943 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 230 IPR001680 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 272 IPR001680 GO:0005515
Rops3g02662 724 MobiDBLite consensus disorder prediction 539 565 - -
Rops3g02662 724 ProSitePatterns Trp-Asp (WD) repeats signature. 301 315 IPR019775 -
Rops3g02662 724 SMART WD40_4 191 230 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 275 314 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 233 272 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 317 356 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 402 442 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 144 188 IPR001680 GO:0005515
Rops3g02662 724 SMART WD40_4 359 399 IPR001680 GO:0005515
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 198 230 - -
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 365 IPR001680 GO:0005515
Rops3g02662 724 CDD WD40 160 441 - -
Rops3g02662 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 156 188 IPR001680 GO:0005515
Rops3g02662 724 MobiDBLite consensus disorder prediction 1 89 - -
Rops3g02662 724 MobiDBLite consensus disorder prediction 1 30 - -