Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops3g02648 | ATGAACAAAGAGGTTACAAGCATTGTTAAGGCTTGGGAAGCAGCAGTTCGTATATCAGCTGGTCCAAAGAAAAGGGCAAACAGCATTTTCACACCAATGTCTGTTGCCCATGTTGATGATGATGAGCCAAGGCAAGGTGAGGCTTACCATGTTGAGAAGATTCTCTCCAATGGTGACTTTTACAAAGGCCAATGGCTTGATAATTTCCCTCATGGTAATGGAAAGTATTTGTGGACAGATGGGTGCATGTATGTTGGTGAATGGTTGAAAGGAAGCATCATTGGTAAGGGAAGGTTTAGTTGGCCAAGTGGTGCTACCTATGAAGGTGATTTCAAGAGTGGTTATATGGATGGTAAAGGTAGTTACATAGGTTCTTCTGGGGATACCTATAAAGGTTGTTGGGTTATGGATATGAGACATGGACAAGGAACTCAGAGTTATCCTAATGGGGATTTCTATGATGGAGAATGGAGGAAAGGGTTACAGAATGGACATGGTAGGTATCAATGGAAGAATGGGAATCATTATATTGGTCAATGGAGGAATGGTTTGTTTTATGGGAATGGTACCTTGATGTGGAGCAATGGGAATAGATATGATGGTTGTTGGGAAGAGGGGTTACCAAAAGGGAATGGTACATTCAGGTGGAGTGATGGGAGTTTCTATGTTGGTGTTTGGAGTGACGATCCAAAGGACCAAAGTGGGACTTATTACCCTTCTGGTTCTTCTGATAGCAATTTTGATTGGGATCCTCAGGATCTGTTCACTGTGGAGTTGAATGATTGCTATGTTTCTCCTTGTGAGAAGGTGTCAATTTATCCTTCACAGAAGAATTTGAAAATGAATTGGTTAGAGGAATCTAAGAAGGGAACTACTGATGCTAATGGGAGGCCTAGGAGGATGTCAGTGGATGCAAGGCTTAGCAATTACAGTTCTGAAGATGGTTCTTATGCTTCTTATGATGGTTCAAGGAGTCCTCTGGTTGATAATTCTGTTCCAAGAGTGCCACATTTGAGATTAAAGGCTCCAAAGAGACAGGGAGAGACCATATCTAAAGGGCATAAGCACTATGAGCTCATGCTTAATTTGCAGCTAGGTATCAGACATGCTGTTGGAAGACCTGCTCCAAGTACATCTCTTGATTTGAAGGCTTCTGCATTTGATCCCAAAGAAAAAGTATGGACTAAATTTCCACCAGAAGGATCCAAGCACACACCACCTCACCCATCTTGTGAGTTTAGATGGAAAGACTATTGTCCAGTAGTGTTCAGGGCACTAAGAAAATTGTTCAAAGTAGATCCAGCTGATTACATGCTATCATTATGTGGGAATGAAGCGCTTCGGGAGCTCTCATCCCCTGGAAAAAGTGGAAGCTTTTTTTATTTGACCAATGATGACCGATATATGATAAAGACCATGAAGAAAGCAGAAGTAAAAGTTTTCTTGAGAATGCTTCCTGGTTACTACAAACATGTTCGGGCTTTTGAGAACACTCTAGTCACCAAGTTCTTTGGCCTCCATTGTGTTAGAGTAACAGGAGCATCCCAGAAGAAGGTTCGATTTGTGATCATGGGAAATCTATTCTGTTCACAATATGCAATCCATAGGCGCTTTGACTTGAAAGGTTCAACCTTTGGTCGCACAACCGATAAACCCGAGTCAGAAATAGAGCCTACAACAACACTTAAGGACCTTGACTTAAATTATATATTCCGGTTACGAAAGTCTTGGTTTCAAGAATTCTGCAGGCAAGTGGATAGGGACTGTGACTTTCTTGAACAGGAGAGGATTATGGATTACAGTATGTTGGTAGGTCTTCACTTTCGAGGAATGGCATGTAGTGACACGGTTACACCTTCTGGTTGCAGTCCAGGCCCTCAAACCCCAACTGGTATTGATAACTTTGATGATGGAGCCCCTCGCCTTTCTGGAGTGGATGTGGATCATCTTGTAGTAGACCCTAGACGGTGGATTCAATTAGGTATAAACATGCCAGCACGGGCTGAATTGACTAAACGAAAAAGTGTTTCTGACAGTGTTCAGCTGGTTGGAGAACCAACAGGGGAGTTATATGAGATTATCATCTTTTTTGGGATAATAGACATATTACAAGACTATGACATTAGTAAAAAACTTGAGCATGCTTACAAATCATTCCAATATGATCCATCCACAATCTCAGCTGTTGATCCAAGGCTATACTCAAGACGGTTTCGCGATTTCATCTTCAGAGTTTTTGTAGAGGACACTTGA | 2253 | 0.4177 | MNKEVTSIVKAWEAAVRISAGPKKRANSIFTPMSVAHVDDDEPRQGEAYHVEKILSNGDFYKGQWLDNFPHGNGKYLWTDGCMYVGEWLKGSIIGKGRFSWPSGATYEGDFKSGYMDGKGSYIGSSGDTYKGCWVMDMRHGQGTQSYPNGDFYDGEWRKGLQNGHGRYQWKNGNHYIGQWRNGLFYGNGTLMWSNGNRYDGCWEEGLPKGNGTFRWSDGSFYVGVWSDDPKDQSGTYYPSGSSDSNFDWDPQDLFTVELNDCYVSPCEKVSIYPSQKNLKMNWLEESKKGTTDANGRPRRMSVDARLSNYSSEDGSYASYDGSRSPLVDNSVPRVPHLRLKAPKRQGETISKGHKHYELMLNLQLGIRHAVGRPAPSTSLDLKASAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMLSLCGNEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVFLRMLPGYYKHVRAFENTLVTKFFGLHCVRVTGASQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKPESEIEPTTTLKDLDLNYIFRLRKSWFQEFCRQVDRDCDFLEQERIMDYSMLVGLHFRGMACSDTVTPSGCSPGPQTPTGIDNFDDGAPRLSGVDVDHLVVDPRRWIQLGINMPARAELTKRKSVSDSVQLVGEPTGELYEIIIFFGIIDILQDYDISKKLEHAYKSFQYDPSTISAVDPRLYSRRFRDFIFRVFVEDT* | 751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops3g02648 | 750 | SUPERFAMILY | SAICAR synthase-like | 352 | 746 | - | - | |
| Rops3g02648 | 750 | Gene3D | Phosphatidylinositol Phosphate Kinase II Beta | 342 | 526 | IPR027484 | - | |
| Rops3g02648 | 750 | FunFam | Phosphatidylinositol 4-phosphate 5-kinase 8 | 137 | 181 | - | - | |
| Rops3g02648 | 750 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 56 | 160 | - | - | |
| Rops3g02648 | 750 | SMART | PIPK_2 | 383 | 747 | IPR002498 | GO:0016307|GO:0046488 | |
| Rops3g02648 | 750 | Pfam | Phosphatidylinositol-4-phosphate 5-Kinase | 442 | 744 | IPR002498 | GO:0016307|GO:0046488 | |
| Rops3g02648 | 750 | Gene3D | - | 135 | 259 | - | - | |
| Rops3g02648 | 750 | ProSiteProfiles | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 349 | 746 | IPR002498 | GO:0016307|GO:0046488 | |
| Rops3g02648 | 750 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 147 | 242 | - | - | |
| Rops3g02648 | 750 | Gene3D | - | 44 | 90 | - | - | |
| Rops3g02648 | 750 | Gene3D | - | 91 | 134 | - | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 199 | 220 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 153 | 174 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 107 | 129 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 61 | 83 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 84 | 105 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 176 | 198 | IPR003409 | - | |
| Rops3g02648 | 750 | Pfam | MORN repeat | 130 | 151 | IPR003409 | - | |
| Rops3g02648 | 750 | CDD | PIPKc_AtPIP5K_like | 357 | 745 | - | - | |
| Rops3g02648 | 750 | SMART | morn | 174 | 195 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 105 | 126 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 128 | 149 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 197 | 218 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 151 | 172 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 82 | 103 | IPR003409 | - | |
| Rops3g02648 | 750 | SMART | morn | 59 | 80 | IPR003409 | - | |
| Rops3g02648 | 750 | PIRSF | PIP5K_plant | 2 | 325 | IPR017163 | GO:0005524|GO:0016308 | |
| Rops3g02648 | 750 | PIRSF | PIP5K_plant | 321 | 750 | IPR017163 | GO:0005524|GO:0016308 | |
| Rops3g02648 | 750 | Gene3D | - | 527 | 631 | - | - | |
| Rops3g02648 | 750 | Gene3D | - | 658 | 746 | - | - | |
| Rops3g02648 | 750 | FunFam | Phosphatidylinositol 4-phosphate 5-kinase | 342 | 526 | - | - | |
| Rops3g02648 | 750 | PANTHER | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE | 70 | 747 | IPR023610 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops3g02648 | Rops-Chr3 | 56199043 | 56203931 | Dispersed/Wgd |