Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02638 ATGAAACTCCAACGTTTACTCACTCCTTTGCTTCTTTTCCTCCTCTTCTCCCTAACCCAAGGGCTGAACCCCAAATGTGATGCCCAAGATCATGGCTCAACCCTCCAAGTGTTCCATATTTTCAGCCCATGTTCCCCATTTAGGCCATCAAAGCCAATGTCATGGGAAGAGAGTGTCCTACAACTGCAAGCAAAGGACCAAGCAAGGATCCAATACCTATCTAGCTTGGTTGCTAGGAAATCAGTTGTGCCAATTGCTTCAGGGAGGCAAATTATACAGAGTCCAACATACATAGTGAAGACCAAGATTGGTACCCCAGCTCAAACCTTGCTTATGGCTATGGACACTAGCAATGATGCTGCTTGGGTCCCTTGTACTGGTTGTGTTGGTTGCTCATCAAAATTTTTTACACCTGCTAAGTCCACCACTTTCAGGAACCTTAGATGTGGTGCTCCTCAGTGCAAACAGGTACCAAACCCCACTTGCGGTGGAAGCGCGTGTGCATTCAACCTCACATATGGCAGCTCCACCGTGGCAGCTAAGCTGGTCAGAGACACACTGACCCTAGCCACTGACCCAGTTCCAGGCTACACCTTTGGTTGCATTCAGAAGACAACAGGGAGCTCAGTACCACCACAGGGGCTTTTGGGCCTGGGCCGAGGCCCATTGTCACTATTGGCCCAAACCCAAAAGCTCTACCAATCCACATTCTCTTACTGCTTGCCCAGCTTCAAAGCCCTCAACTTCACTGGATCATTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAGTTTACTCCTCTTCTCAAAAATCCTAGAAGATCATCACTCTACTATGTTAACTTGGTTGCTATTAGGGTTGGCAGGAGAATTGTTGACATCCCTCCAGCAGCATTAGCTTTCAACCCAACCACTGGCTCAGGCACCATTTTTGATTCTGGTACGGTATTCACCCGGCTGGTTGAACCAGCTTACACCGCCGTCCGAAATGAGTTCCGTCGACGAGTTGGCCGGAAACTGACCGTGACATCCCTAGGAGGGTTTGACACATGCTACACAGTCCCAATAGTTGCACCTACAATAACATTCATGTTCTCCGGCATGAATGTGACACTTCCACCGGACAACATCCTCATACATAGTACCGCCGGCAGCATCACTTGTTTGGCCATGGCGGGGTCGCCGGATAATGTGAACTCGGTGCTGAATGTGATAGCCAACATGCAACAACAAAACCACCGTGTTCTCTACGATGTGCCCAATTCAAGGCTTGGTGTTGCTCGTGAAGTTTGTACCTAA 1302 0.4923 MKLQRLLTPLLLFLLFSLTQGLNPKCDAQDHGSTLQVFHIFSPCSPFRPSKPMSWEESVLQLQAKDQARIQYLSSLVARKSVVPIASGRQIIQSPTYIVKTKIGTPAQTLLMAMDTSNDAAWVPCTGCVGCSSKFFTPAKSTTFRNLRCGAPQCKQVPNPTCGGSACAFNLTYGSSTVAAKLVRDTLTLATDPVPGYTFGCIQKTTGSSVPPQGLLGLGRGPLSLLAQTQKLYQSTFSYCLPSFKALNFTGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAIRVGRRIVDIPPAALAFNPTTGSGTIFDSGTVFTRLVEPAYTAVRNEFRRRVGRKLTVTSLGGFDTCYTVPIVAPTITFMFSGMNVTLPPDNILIHSTAGSITCLAMAGSPDNVNSVLNVIANMQQQNHRVLYDVPNSRLGVAREVCT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02638 433 FunFam aspartyl protease AED3 75 256 - -
Rops3g02638 433 Pfam Xylanase inhibitor N-terminal 97 256 IPR032861 -
Rops3g02638 433 SUPERFAMILY Acid proteases 95 432 IPR021109 -
Rops3g02638 433 Gene3D Acid Proteases 73 256 IPR021109 -
Rops3g02638 433 FunFam Aspartyl protease AED3 257 433 - -
Rops3g02638 433 Gene3D Acid Proteases 257 433 IPR021109 -
Rops3g02638 433 PANTHER ASPARTYL PROTEASES 13 426 IPR001461 GO:0004190|GO:0006508
Rops3g02638 433 ProSiteProfiles Peptidase family A1 domain profile. 97 428 IPR033121 -
Rops3g02638 433 Pfam Xylanase inhibitor C-terminal 279 426 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02638 Rops-Chr3 55807423 55811475 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02638 3 55807423 55811475 Rops3g02638 3 55807423 55811475 ECH