Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops3g02633 | ATGTCTGATTTGGTGGCCCGAACGGGTCGGCATCAGCAGCGGTACGAAAACGGTTATCGCCTTGTTGCCGGGTGTGTTCCATTTAGGTATAAAAGTTCTGATGATTGTGGAGACTCTAGTTCTGAGAAGATTGTTGAAGTACTTATGATTAATTCACCTAGTGGACCAGGTCTTTTGTTTCCAAAGGGAGGCTGGGAGAATGATGAAACTGTTGAGGAAGCAGCTGTAAGAGAAGCTATGGAAGAGGCGGGAGTTCGAGGAGACCTAATGGATTTTCTTGGGTACTACGAGTTTAGAAGTAAGACCCATCAAGATGAGTTCAGTCCAGAAGGGTTATGTAAAGCAGCAATGTTCGCCTTATTTGTCAACGAGGAACTTGAGTTATGGCCTGAGCAAAGTACCAGAAATAGGAGTTGGCTGGCTGTATCTGAGGCACTTGGAAGCCTCCGGCATGCATGGATGAGGGACGCGCTGGAATGCTTCTGTAAATGGCACGAGGATAAGTTGGTGAGTGGAACCAGAGGATTTACCTGA | 534 | 0.4682 | MSDLVARTGRHQQRYENGYRLVAGCVPFRYKSSDDCGDSSSEKIVEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAMEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCKAAMFALFVNEELELWPEQSTRNRSWLAVSEALGSLRHAWMRDALECFCKWHEDKLVSGTRGFT* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops3g02633 | 177 | FunFam | Nudix hydrolase 16, mitochondrial | 5 | 161 | - | - | |
| Rops3g02633 | 177 | ProSitePatterns | Nudix box signature. | 63 | 84 | IPR020084 | GO:0016787 | |
| Rops3g02633 | 177 | SUPERFAMILY | Nudix | 10 | 165 | IPR015797 | - | |
| Rops3g02633 | 177 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 5 | 163 | - | - | |
| Rops3g02633 | 177 | Pfam | NUDIX domain | 47 | 156 | IPR000086 | - | |
| Rops3g02633 | 177 | PANTHER | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE | 5 | 164 | - | - | |
| Rops3g02633 | 177 | CDD | Nudix_Hydrolase_9 | 21 | 155 | IPR047198 | GO:0016462 | |
| Rops3g02633 | 177 | ProSiteProfiles | Nudix hydrolase domain profile. | 18 | 162 | IPR000086 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops3g02633 | Rops-Chr3 | 55685345 | 55690013 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Rops3g02633 | 3 | 55685345 | 55690013 | Rops3g02633 | 3 | 55685345 | 55690013 | ECH |