Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02531 ATGGGTGCAGCTAAAGACCATGTAAACAATAAAGAAGTTGCCACAAAAAATTCTGTAGATGACAGAGTTGGTGATGCAAAAAGTCCTGTTGATGTTAAAGCCAGTGGTGTAGAAAATCTTGTAAATGATAAAGAAGGTTCTGAAGAAACCCTTGTAAAAGACAATGCTAATTGTCTTCCAAATGAAGCAAAGGAGATTTTGAAATCATTGGCAAGTAAATGGGAGAATGTAGTGGATGCAAATGCATTTCAGGTTATCCCTCTTAAGGGGGCAATGACCAATGAGGTATTCATGATAAAATGGCAAACAACAACAGGAGAAACCTCACAAAAGGCTCTAGTTAGAATCTATGGTGATGGAACTGACATTTTCTTTGATAGGGATAATGAGATCCAAACATTTGAATTCATTTCAAAGAATGGGCAGGGACCTAGATTGCTAGGAAGGTTTGCACATGGCCGTGTTGAAGAATTCATACATGCCCGGACATTATCAGCATCTGATCTGCGTGATCCATCAATTTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTCCATGATCTTGACATGCCTGGTCCAAAGAATGTGAACCTTTGGGATAGATTGAGAAATTGGCTTAGTGAGGCCAGGCGCTTGGCTTCTCCTGAAGAAGTTGAAACATTTCATTTGGACACAATGGACAAGGAAATCTCTATTTTGGAAAATGAACTATCAAGCACTCACCAATGCATAGGGTTTTGCCATAACGATTTACAATATGGTAACATCATGCATCATGAAGAGACCAATTCTGTGACTATATTAGATTATGAATATGCAAGTTATAATCCAGTGGCATATGATATAGCAAACCACTTCTCTGAGATGGCTGCCAACTATCATACAGAAACCCCACATATTCTTGACTTCAGTAAATATCCTGATTTGGAGGAGCGTCAAAGATTTGTGCAGACATACTTGAGTTCTTCAGGTGAACAACCCAGTGGCAGTGAAGTGCAGCAGCTACTTGATGAAGCTGAGAAGTATACGCTTGCAAATCATCTATTTTGGGGCTTTTGGGGAATAATTTCGGAGCATGTAAACAAAATTGACTTTGACTACAAGGAGTATGCAAAACAGAGGTTTCAAGAGTACTGGTCAAGGAAAACTTATCTTTTGAGCTCCAATGGATCTTCCCATGATAATGTTATTAAAGGGGAGAAAGCACTGAAATCGACCTCCAGCAAAAAACAAGCGAAGAAGCCTAGAATCATTAGGAAGTTGAAGAAATATTTTGGTCTCGGTTTATTCAGATCGAAACACTAG 1305 0.3908 MGAAKDHVNNKEVATKNSVDDRVGDAKSPVDVKASGVENLVNDKEGSEETLVKDNANCLPNEAKEILKSLASKWENVVDANAFQVIPLKGAMTNEVFMIKWQTTTGETSQKALVRIYGDGTDIFFDRDNEIQTFEFISKNGQGPRLLGRFAHGRVEEFIHARTLSASDLRDPSISALIAAKMKEFHDLDMPGPKNVNLWDRLRNWLSEARRLASPEEVETFHLDTMDKEISILENELSSTHQCIGFCHNDLQYGNIMHHEETNSVTILDYEYASYNPVAYDIANHFSEMAANYHTETPHILDFSKYPDLEERQRFVQTYLSSSGEQPSGSEVQQLLDEAEKYTLANHLFWGFWGIISEHVNKIDFDYKEYAKQRFQEYWSRKTYLLSSNGSSHDNVIKGEKALKSTSSKKQAKKPRIIRKLKKYFGLGLFRSKH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02531 434 MobiDBLite consensus disorder prediction 9 28 - -
Rops3g02531 434 PANTHER CHOLINE/ETHANOALAMINE KINASE 49 388 - -
Rops3g02531 434 Pfam Choline/ethanolamine kinase 110 310 - -
Rops3g02531 434 SUPERFAMILY Protein kinase-like (PK-like) 57 385 IPR011009 -
Rops3g02531 434 MobiDBLite consensus disorder prediction 1 28 - -
Rops3g02531 434 CDD ETNK_euk 83 381 - -
Rops3g02531 434 Gene3D Phosphorylase Kinase; domain 1 70 158 - -
Rops3g02531 434 Gene3D - 118 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02531 Rops-Chr3 52430721 52437886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02531 46 389 Acyl Lipid Metabolism Gene Families AT1G74320 64.826 7.72e-175 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02531 3 52430721 52437886 Rops3g02531 3 52430721 52437886 ECH
Rops7g02238 7 38459515 38463006 Rops3g02531 3 52430721 52437886 PCT