Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02523 ATGGCGGCTATGCCTCCTTCGTTATCTCCCTCTCGCACTACCTGCGCTTCTCTTCTTCGTCAATTGCAGATGATATGGGATGAGATCGGGGAGTGTGACAATGACAGAGACAATATGCTTCTTCAACTGGAGCAAGAGTGCCTTGACATTTATCAGAAAAAGGTTGAGGAAACGAGAAAGCACAAGGCTGACTTATATCAGTGGTTGGCTGACGCTGAAGCTGAACTTGCCAATCTTGTTTCTTCCCTTGGAGAATCTAGCTCGTTCTCAAGGGGGAAGGGCACTCTTAAGCAGCAATTAGCTACTATAAGACCTGTCTTAGAGGACTTGAGATCAAAGAAGGATGGGAGAATCAAGGAATTTTCAAAGATAAAGTCCCACATTTCTCAGATGTGTGCTGAAATAGCTGGCTATGGGCAGTCCAAAAGTGTCACAGATTCAGAAGTTGATCAAAGTGATCTGACAGTGAAGAAATTGGGGGAACTCAAGTTGCATCTCCAGGAACTTCAGAATGAAAAGATCTTGCGCCAGCAGAAAGTAAGGAGCCATATCAATACTATTAGTGAGCTTTCAGCAGTAATGTCAATTGATGTTGTGAAGACTTTAAATGAAATTCACCCAAGCTTGGGTGATTCATCAAAAGGTACACCACAGAGCATCAGCAATGACTCTCTTGCCAGATTAACTGGGGTTATTCATTCATTAAAGCAGGAGAAGGAACAAAGGCTACACAAGGTACAAGAGCTTGGTAAATTCTTGGCAGAGCTATGGGATCTTATGGAGACACCAATTGATGAGCAAAAGGCCTTCATCCATGTTACTGGATTAATTCCAGCATCAGTTGACGAAGTGTCAACAAAAGGGTGCCTTTCTGCAGATGTCATTGAGCAGGTTGAGGTTGAAGTTCAGCGCTTAAATGCTTTGAAAGCCAGTAAGATGAAGGATTTAGTGTTTAAGAGACAGAATGAACTTGAAGAAATTTACAGAGGAGTTCACATGGATGTCGATAGTGAAGCTGCTAGACAGATTCTAACCAGCCTCATAGAATCTGGCAATATTGATCTGTCTGATTTGCTTCAAAGCATGGATGATCAAATCATAAAAGCCAAAGAGCAAGCTCTAAGCAGAAGAGAGATCTTAGATAGGGTTGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAGGGATGAAAATCGATATAGTGCAGTAAGAGGAGCGCACAAAAATTTGAAGCGTGCGGAGAAAGCACGGATTCTTGTCAGCAAGATACCATCTATTGTTGAGAATTTGACTGCAAAAGTAAAAGCCTGGGAGATGGAGAAAGGAATACCTTTCTTATATGAAAAGGTTCCATTGTTACATAGCTTGGATGAATATAATGTACAGCGGCAACTGAGAGAAGAGGAGAAGCGTAAATCTCGGGAGCAGAAGCGGATTCAGGAACAACTTGCTGTAGAACAAGAGGCACTTTTTGGTTCCAGGTCTGCAACAAAGAAGCCTCTGGGTCAGAGCACTAACGCTAACACCATAGTTGGGACACCAATTGGGCGCCGAATGCTTACTCCTTCAAGCCGTTATGGAACCTCTGGTGGAAAGGAACGTAGAGAAAGTGGCAGAGTGAATAACATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGATTCTGTTTCTAGGGGCAGTTAA 1704 0.4255 MAAMPPSLSPSRTTCASLLRQLQMIWDEIGECDNDRDNMLLQLEQECLDIYQKKVEETRKHKADLYQWLADAEAELANLVSSLGESSSFSRGKGTLKQQLATIRPVLEDLRSKKDGRIKEFSKIKSHISQMCAEIAGYGQSKSVTDSEVDQSDLTVKKLGELKLHLQELQNEKILRQQKVRSHINTISELSAVMSIDVVKTLNEIHPSLGDSSKGTPQSISNDSLARLTGVIHSLKQEKEQRLHKVQELGKFLAELWDLMETPIDEQKAFIHVTGLIPASVDEVSTKGCLSADVIEQVEVEVQRLNALKASKMKDLVFKRQNELEEIYRGVHMDVDSEAARQILTSLIESGNIDLSDLLQSMDDQIIKAKEQALSRREILDRVEKWKFAAEEEKWLDEYERDENRYSAVRGAHKNLKRAEKARILVSKIPSIVENLTAKVKAWEMEKGIPFLYEKVPLLHSLDEYNVQRQLREEEKRKSREQKRIQEQLAVEQEALFGSRSATKKPLGQSTNANTIVGTPIGRRMLTPSSRYGTSGGKERRESGRVNNIIPVNYVALPKDDSVSRGS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02523 567 Gene3D - 366 499 - -
Rops3g02523 567 Coils Coil 462 491 - -
Rops3g02523 567 Coils Coil 295 315 - -
Rops3g02523 567 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 562 IPR007145 GO:0000226|GO:0008017
Rops3g02523 567 MobiDBLite consensus disorder prediction 521 545 - -
Rops3g02523 567 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02523 Rops-Chr3 52152893 52171486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02523 13 533 EF-hand Containing Proteins AT5G62250 37.363 9.13e-95 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02523 3 52152893 52171486 Rops3g02523 3 52152893 52171486 ECH