Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02522 ATGAAAGTACTAACTTGTTCTTCTTCCATTCCGATTATTCCATCCCTTTTCTCTTTCTTCTTCTTTATCTCCTTCGCTCTGTTCTTCACTGTTTCGATATCGTTTGGGGATTGCTCCGAATTTGATCATCACGCTTCAATGGCCACACCTGGAGGCTTGCGCGATTCACTTGGATCTCAGAACAGCGCTGAAATCGAATCCCTTGGGAAATTCGCCGTAGAAGAACACAACAAGAAACAGAATGCGCTTCTGGAGTTTGCAAGGGTTGTGAAAGCACAGGAACAGGTTGTTGCTGGTACCATGCATCATCTTACTCTTGAGGCTGTTGATGGGGGTGAGAAGAAGATCTATGAAGCCAAGGTCTGGGTGAAACCCTGGTTGAACTTCAAAGAGCTTCAAGAGTTCAAGCATGCTGGTGATGCACCATCATTTACCTCTGCAGATCTTGGTGTGAAAAGAGATGGCCACCAACCAGGATGGCAATCTGTGCCACCGCATGACCCTCAAGTTCAGGATGCAGCGAGTCATGCTATCAAGGCCATCCAGCAGAGGTCTAATTCACTAGTGCCCTATGAGCTTCATGAGGTTGCTGATGCAAAGGCTGAGGTCATTGATGATGTTGCTAAGTTTAATCTGCTCCTTAAGGTCAAACGGGGAGAGAAGGAAGAGAAGTTCAAGGTAGAGGTACACAAGAATAACGAAGGGGGGTTCCTTCTGAATCAGATGCAACAAGACCATTCCTAA 744 0.4624 MKVLTCSSSIPIIPSLFSFFFFISFALFFTVSISFGDCSEFDHHASMATPGGLRDSLGSQNSAEIESLGKFAVEEHNKKQNALLEFARVVKAQEQVVAGTMHHLTLEAVDGGEKKIYEAKVWVKPWLNFKELQEFKHAGDAPSFTSADLGVKRDGHQPGWQSVPPHDPQVQDAASHAIKAIQQRSNSLVPYELHEVADAKAEVIDDVAKFNLLLKVKRGEKEEKFKVEVHKNNEGGFLLNQMQQDHS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02522 247 FunFam Cysteine proteinase inhibitor 47 145 - -
Rops3g02522 247 SUPERFAMILY Cystatin/monellin 156 238 IPR046350 -
Rops3g02522 247 SMART CY_4 48 138 IPR000010 GO:0004869
Rops3g02522 247 CDD CY 51 137 IPR000010 GO:0004869
Rops3g02522 247 SUPERFAMILY Cystatin/monellin 59 141 IPR046350 -
Rops3g02522 247 Gene3D - 47 146 - -
Rops3g02522 247 Gene3D - 151 240 - -
Rops3g02522 247 FunFam Cysteine proteinase inhibitor 157 246 - -
Rops3g02522 247 PANTHER CYSTATIN FAMILY MEMBER 42 195 IPR027214 GO:0004869
Rops3g02522 247 Pfam Aspartic acid proteinase inhibitor 62 137 IPR000010 GO:0004869
Rops3g02522 247 ProSitePatterns Cysteine proteases inhibitors signature. 94 107 IPR018073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02522 Rops-Chr3 52143612 52148219 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02522 3 52143612 52148219 Rops3g02522 3 52143612 52148219 ECH