Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02484 ATGGGGGAGGAGAATAAGAGAGTACCCTTGTTGGAGAAGCAATACTATAAGGAGTGCCCTGGTTGTAAGGTGGAACAAGCCAAACAACAGAACCAGGGTGTATCCATTAGAAATCTTTTTGTTATATGGATGGTTGTGTTATGTGCAGCACTGCCTATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTCAATGTTGCAGAAACAGAAGCTGATATTAGTACTTATGCTGGTTATGTGGGATCTGCATTCATGCTTGGCAGATGTTTGACATCTTTACTCTGGGGAATGATTTCTGATCGTTATGGTCGAAAACCTGTTATAGTTATAGGGATTATCACAGTTGTCATTTTCAACACGCTATTTGGCCTTAGTACAAGTTTTTGGATGGCTGTTATCACGAGATTTCTTCTGGGAAGTTTAAATGGTATACTTGGACCAGTGAAGGCCTATGCTACTGAACTTTTTAGAGAAGAGCACCAAGCACTAGGACTCTCTACTGTCAGTGCAGCATGGGGTGTAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAATACCCACATATATTTCCAAAGGATTCCTTTTGGGATAGGTTTCCATACTTCTTGCCCTGCTTTATAATATCAGGCCTTGCATTTGCAGCAGCTATTGCCTGTATCTGGATTCCGGAAACACTTCACAATCACAATGGTAGCAATGAGTCCATAGATGATGCTGAAGCTTTAGAAAATGGAAGCAGCGAGGTTGGCAAAGAAAAAATAATCCAAAAGAATGAAAACCTCTTCAAGAATTGGCCCTTAATGTCATCAATCATTGTTTATTGTGTTTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCTTTATGGGCTGTTAGTCCTCCAAGGCTGGGGGGTTTGAACTTTACAACTGATGATGTCGGTGATGTTCTTGCAATATCAGGTCTTGCACTTATTATCTATCAACTTACCCTATACCCTTCTGTGGAAAGAGCTTGCGGACCTATTGGCATTGCTCGCATCACAGGGATATTTTCCATACCACTTTTGCAAAGTTACCCCTTCATAGCAATGTTGTCAGGAGTAACACTATACATAGTGTTAAGTGTTGCTTCTATTCTGAAGAATATTCTGTCTGTGACCATTACAACTGGTTTATTCCTCATACAAAATAGATTAGTGGAACAACACCAAAGAGGTGCAGCTAATGGCATTGCTATGACAGCTATGTCTCTATTCAAAGCTATTGGCCCTGCTGCAGGTGGTGCAATATTAACTTGGTCACAAAAGCGGATGGATGCTTCTTTCCTCCCAGGCACCCATATGGTCTTCTTTTTCCTAAATTTAGTTGAAGGACTTGGAGTACTGATGATGTTCACACCATTCCTTGGTGAGAAGAAGAAAACACACTCAGATCAATTACACTGA 1461 0.4073 MGEENKRVPLLEKQYYKECPGCKVEQAKQQNQGVSIRNLFVIWMVVLCAALPISSLFPFLYFMVRDFNVAETEADISTYAGYVGSAFMLGRCLTSLLWGMISDRYGRKPVIVIGIITVVIFNTLFGLSTSFWMAVITRFLLGSLNGILGPVKAYATELFREEHQALGLSTVSAAWGVGLIIGPALGGYLAQPVEKYPHIFPKDSFWDRFPYFLPCFIISGLAFAAAIACIWIPETLHNHNGSNESIDDAEALENGSSEVGKEKIIQKNENLFKNWPLMSSIIVYCVFSLHDIAYQEVFSLWAVSPPRLGGLNFTTDDVGDVLAISGLALIIYQLTLYPSVERACGPIGIARITGIFSIPLLQSYPFIAMLSGVTLYIVLSVASILKNILSVTITTGLFLIQNRLVEQHQRGAANGIAMTAMSLFKAIGPAAGGAILTWSQKRMDASFLPGTHMVFFFLNLVEGLGVLMMFTPFLGEKKKTHSDQLH* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02484 486 Gene3D MFS general substrate transporter like domains 34 462 IPR036259 -
Rops3g02484 486 PRINTS Tetracycline resistance protein signature 168 190 IPR001958 GO:0022857
Rops3g02484 486 PRINTS Tetracycline resistance protein signature 111 135 IPR001958 GO:0022857
Rops3g02484 486 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 37 469 - -
Rops3g02484 486 Pfam Major Facilitator Superfamily 42 288 IPR011701 GO:0022857|GO:0055085
Rops3g02484 486 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 477 IPR020846 GO:0022857
Rops3g02484 486 SUPERFAMILY MFS general substrate transporter 37 480 IPR036259 -
Rops3g02484 486 CDD MFS_SLC46_TetA_like 42 461 - -
Rops3g02484 486 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 33 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02484 Rops-Chr3 51281641 51288436 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02484 3 51281641 51288436 Rops3g02484 3 51281641 51288436 ECH