Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02479 ATGTTAAAGTTAATGGATGTTTGCAATGCTCAAGGATTTGCTTATGGCATTATTCCTAAGCAAGGGAAGGCAATAACTGGTGCTTCTGAAAATCTTCGCCTTTGGTGGAAGGAAACAGTCAAGTTTGATCATAATGCTTCTGTTGCAATAGGTAAGTATGAAGCTGGAGTTGGATTGGAAACTACTCACACATTGCATGAATTTCACAACACTAATCTTGGGTCACTTCTATCAACTCTAATGCACAATTGTAATCCACCCCAAAGGTGGTTTCCTTTGGAGGGTGGTGTTCCTCCACCATGGTGGCCTAAAGGAAATGAGGAATGGTGGTCTCAATTGGGTTTTGAGAAGGATCCAGGTCCTCCACCTTATAAAAAGCCTCATGATCTAAAGAAGGATTGGAAGGTTGCAGTTCTCACAGCTGTGATTAAGCACATATCTCCTGATTTTCAAAAGATAAGAAATGTTGTGCGCCAACCCAAGAAACTACAAGAGAAGATGTCTGCTGAGGAGGCTGCTGTTTTGGAATCTGTTATAAATCATGAGGAATTCTTAGCTCAACACACAGCTGCATAA 576 0.4115 MLKLMDVCNAQGFAYGIIPKQGKAITGASENLRLWWKETVKFDHNASVAIGKYEAGVGLETTHTLHEFHNTNLGSLLSTLMHNCNPPQRWFPLEGGVPPPWWPKGNEEWWSQLGFEKDPGPPPYKKPHDLKKDWKVAVLTAVIKHISPDFQKIRNVVRQPKKLQEKMSAEEAAVLESVINHEEFLAQHTAA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02479 191 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 188 IPR006957 GO:0003700|GO:0005634
Rops3g02479 191 Pfam Ethylene insensitive 3 1 183 IPR047091 GO:0003700
Rops3g02479 191 SUPERFAMILY DNA-binding domain of EIN3-like 62 185 IPR023278 GO:0003700|GO:0005634
Rops3g02479 191 Gene3D - 60 191 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02479 Rops-Chr3 51140515 51141090 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02479 1 188 EIL Transcription Factor Family AT2G27050 60.000 4.16e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops3g02479 EIN3 2.1e-81 No_clan