Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02471 ATGGAGGGTGGCAGTGCTGCAAAACGTAGAGCACCAGAAGCAAATGTTGAAGACAATGGCAATGAAGAAATATCTATCGAGGAACTTGAGATGAGAATATTCCACGATAGCATGCGATTGAAGAGGCTTAAAGAAGAAAGGAATCAGAAAGAGAATATGTTAAAGTTAATGGATGTTTGCAATGCTCAAGGATTTGCTTATGGCATTATTCCTAAGCAAGGGAAGCCAATAACTGGTGCTTCTGAAAATCTTCGCCTTTGGTGGAAGGAAACAGTCAAGTTTGATCATAATGCTTCTGTTGCAATAGGTAAGTATGAAGCTGGAGTTGGATTGGAAACTACTCACACATTGCATGAATTTCACAACACTAATCTTGGGTCACTTCTATCAACTCTAATGCACAATTGTAATCCACCCCAAAGGTGGTTTCCTTTGGAGGGTGGTGTTCCTCCACCATGGTGGCCTAAAAGAAATGAGGAATGGTGGTCTCAATTGGGCTTTGAGAAGGATCCAGGTCCTCCACCCTATAAAAAGCCTCATGATCTAAAGAAGGATTGGAAGGTTGCAGTTCTCACAGCTGTGATTAAGCACATATCTCCTGATTTTCAAAAGATAAGAAATGTTGTGCGCCAATCCAAGAAACTACAAGAGAAGATGTCTGCTGATGAGGCTGCTGTTTTGGAGTCTGTTATAAATCATGAGGAATTCTTAGCTCAACACACAGCTGCAAAAAAGTTCCCAGAAGGAAGTGGTGGGTCTAGTGTGATTCATGAGATCAATGATTATGATGGGGATGGCAATGGTGATGGGGCAAATCATTTGCAAGGTCAAAACCAACCCAATAATGCTAATTTGGTTCAAATGGAAACAAATGTTCCAACAAACAGCATTATTTTGAGGCCAGTTCCTATAAGGAAAACTAGACCTCTTGGGGAAGGAATTTATACATGTGATCACTCTCAATGCCCTCATCATAATTACCAAATGTCTTCACCAATTGAACTGTCCATACAAAAATAA 1020 0.4039 MEGGSAAKRRAPEANVEDNGNEEISIEELEMRIFHDSMRLKRLKEERNQKENMLKLMDVCNAQGFAYGIIPKQGKPITGASENLRLWWKETVKFDHNASVAIGKYEAGVGLETTHTLHEFHNTNLGSLLSTLMHNCNPPQRWFPLEGGVPPPWWPKRNEEWWSQLGFEKDPGPPPYKKPHDLKKDWKVAVLTAVIKHISPDFQKIRNVVRQSKKLQEKMSADEAAVLESVINHEEFLAQHTAAKKFPEGSGGSSVIHEINDYDGDGNGDGANHLQGQNQPNNANLVQMETNVPTNSIILRPVPIRKTRPLGEGIYTCDHSQCPHHNYQMSSPIELSIQK* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02471 339 Pfam Ethylene insensitive 3 52 235 IPR047091 GO:0003700
Rops3g02471 339 Gene3D - 112 245 IPR023278 GO:0003700|GO:0005634
Rops3g02471 339 Coils Coil 26 63 - -
Rops3g02471 339 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 330 IPR006957 GO:0003700|GO:0005634
Rops3g02471 339 MobiDBLite consensus disorder prediction 1 22 - -
Rops3g02471 339 SUPERFAMILY DNA-binding domain of EIN3-like 114 237 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02471 Rops-Chr3 50890702 50891721 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02471 12 324 EIL Transcription Factor Family AT3G20770 43.085 6.09e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops3g02471 EIN3 8.4e-81 No_clan