Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02469 ATGCGATTGAAGAGGCTTAAAGAAGAAAGGAATCAGAAAGAGAATATGTTAAAGTTAATGGATGTTTGCAATGCTCAAGGATTTGCTTATGGCATTATTCCTAAGCAAGGGAAGCCAATAACTGGTGCTTCTGAAAATCTTCGCCTTTGGTGGAAGGAAACAGTCAAGTTTGATCATAATGCTTCTGTTGCAATAGGTAAGTATGAAGCTGGAGTTGGATTGGAAACTACTCACACATTGCATGAATTTCACAACACTAATCTTGGGTCACTTCTATCAACTCTAATGCACAATTGTAATCCACCCCAAAAGTGGTTTCCTTTGGAGGGTGGTGTTCCTCCACCATGGTGGCCTAAAGGAAATGAGGAATGGTGGTCTCAATTGGGTTTTGAGAAGGATCCAGGTCCTCTACCCTATTAA 420 0.4071 MRLKRLKEERNQKENMLKLMDVCNAQGFAYGIIPKQGKPITGASENLRLWWKETVKFDHNASVAIGKYEAGVGLETTHTLHEFHNTNLGSLLSTLMHNCNPPQKWFPLEGGVPPPWWPKGNEEWWSQLGFEKDPGPLPY* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02469 139 Gene3D - 75 139 IPR023278 GO:0003700|GO:0005634
Rops3g02469 139 Pfam Ethylene insensitive 3 15 139 IPR047091 GO:0003700
Rops3g02469 139 Coils Coil 6 26 - -
Rops3g02469 139 SUPERFAMILY DNA-binding domain of EIN3-like 77 137 IPR023278 GO:0003700|GO:0005634
Rops3g02469 139 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 9 139 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02469 Rops-Chr3 50860612 50861031 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02469 1 139 EIL Transcription Factor Family AT3G20770 50.562 2.56e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Rops3g02469 EIN3 8.1e-54 No_clan