Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02407 ATGGCCGGGAACTGCTTACCGTCGGTGAAGCTCACCGGAAGTGGCCGGCCGGTGCTATTACCGAACGAAATCGAGTGCTTCTTCCTTTCTGGCGTGGACCTTCTCTGCGAAGACGATCCCAACTCATGGTTCCCTCACCTGAAATCTTGCCTCCTCATTCTCACCACTCACCGCCTCATCTGGCTCCCCGAATCCGCCGCCGCAGGCTCCGCCTTACCTCTCGCAGCGATCTCCCACATTTTCCCTCACAGTAAGTCCTTCAAGTCAGTTTTCGCCTCTCCTAGGGTCCGTTTTCAGGTGTCGATGTCGCCGGAGGGTGGAGGCGCCGCGAGATCTGTGGTGGTGACCGTTGTGGTTAGGGGGAAGGGTGAATTCGACGCGTTCGTAGCAAAGTTTTGGGAGAATTGGCGGGGCAGGGCGTGGGAGGAGCAGGAGAGTAATCGGAGTTCGGGTTCAAATGCGGTGGTGGCGACGGCGTCATCATCGAGTGGGATTTATTCGAGTGATGGGACGGTGAGGATGGTGGGAGTGTCTGGGATATTGAGGAAGGAACAGGAAATGTGGGAAAGTACTGATAGGAGCTTGCAGGAGGCTTTTCAAGATTTGAATGCTCTCATGAGCAAGGCTAAAGAAATGGTGATGCTAGCAGAGAAAATGAGGCTAAAACTTTTGTCTGGCTCTAATTCTCAAACCAATGCAACTAATGATGAAGAGATGGGTTCAAAGGAAGAAATGCAAGATTGGTTATTGAGTGTTGGTATAATATCCCCTGTTACCAAAGAGTCTGCGGGTGCTTTGTATCATCAACAGTTATCTCGTCAGTTGGCAGATTTTGTTAAAGTTCCACTTGAGAGAGCTGGAGGAATTATCAATCTTATTGATATTTATTGTCTCTTCAATCGTGCTCGTGGCACAGAATTGATCTCGCCTGATGATTTGTTGCAAGCATGCTCTCTGTGGGAGAAGTTTGATGTTCCAGTTGTTCTGCGGAAGTTTGATAGTAGAGTCATGGTAATACAGACCAAGTCCCACAGTGATGAGGAGGTTTTCACTAGAATCAAGATGCTTGTTATGAAGCCTGATGCTCTTCGAGCTGGGATAAGTGCTAGTGATGCTGCAATGACACTAGGAGTTGCCCCAGCAATGGCAAAGGAACATCTCTTGTCTGCAGAGAGCAAGGGTATACTCTGCAGAGATGTAAGCCCTGATGGATTTCACTTTTATATTAACTTGTTCCCTGAAATTGATAGAGATGATATGTATTTAGTTCAAGATCAGGGGGTTTATGCTTCATGGGTAAAGGCAAACCATGCTTGTGGTTAG 1323 0.4822 MAGNCLPSVKLTGSGRPVLLPNEIECFFLSGVDLLCEDDPNSWFPHLKSCLLILTTHRLIWLPESAAAGSALPLAAISHIFPHSKSFKSVFASPRVRFQVSMSPEGGGAARSVVVTVVVRGKGEFDAFVAKFWENWRGRAWEEQESNRSSGSNAVVATASSSSGIYSSDGTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLERAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSRVMVIQTKSHSDEEVFTRIKMLVMKPDALRAGISASDAAMTLGVAPAMAKEHLLSAESKGILCRDVSPDGFHFYINLFPEIDRDDMYLVQDQGVYASWVKANHACG* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02407 440 Gene3D - 10 149 IPR011993 -
Rops3g02407 440 Gene3D - 190 264 - -
Rops3g02407 440 SUPERFAMILY "Winged helix" DNA-binding domain 303 415 IPR036390 -
Rops3g02407 440 ProSiteProfiles GLUE domain profile. 9 148 IPR021648 GO:0032266|GO:0043130
Rops3g02407 440 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 8 412 IPR037855 GO:0000814|GO:0032509|GO:0043130
Rops3g02407 440 Gene3D - 266 342 IPR036388 -
Rops3g02407 440 FunFam Vacuolar protein sorting protein (Vps36) 264 341 - -
Rops3g02407 440 FunFam vacuolar protein sorting-associated protein 36-like 343 414 - -
Rops3g02407 440 Pfam Vacuolar protein sorting protein 36 Vps36 11 100 IPR021648 GO:0032266|GO:0043130
Rops3g02407 440 Gene3D - 343 414 IPR036388 -
Rops3g02407 440 SUPERFAMILY PH domain-like 5 109 - -
Rops3g02407 440 Pfam EAP30/Vps36 family 175 399 IPR040608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02407 Rops-Chr3 49158367 49164975 Dispersed