Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02406 ATGTTGGAACTACCATTCAAAATGACACTCCGTTTCCCCATTTTGGATTTCAAGTCCTTACCCTTTGCTCAGAACTTGGAGTCTGAACTGTTAGGTGGTGCAGTTGCTCTTGTTGCTGTTGGCCTTACAGCTGCTTATATTTACTATCATCGCATGAAAAACCCAGAAGGTTGCTTGGACCCCAAAAATTTCAAAGAATTCAAACTTGTGAAGAAGACCCAGCTCAGCCACAATGTTGCAAGATTCAAATTTGCCCTCCCTACTCCTACTTCGAAATTGGGCCTTCCTGTTGGAAAAAACATACTTGCCAGGGGAAGAGATAGCCAAGGAGAGGAAGTTCTGAGATCATACACCCCAATCACGTTGGATTCAGATCTTGGCTACTTTGAATTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAGGGTGACTACTTGGCCGTGAAGGGCCCCAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTATGGCATTTGGAATGCTTGCTGGAGGTTCAGGCATTACCCCAATGTTTCAGCTCATTAGAGCCATACTTGAAAATCCTAAGGACAAAACAAAGCTGTACCTCATTTACGCCAATGTCACAGTGGACGACATTCTGTTAAAGGAAGAACTAGATAGCTTTGCGAACTCATATCCTCACAGGTTCCGAGTCTTTCATGTTCTTAATAAGCCTCCTGAACAATGGAATGGTGGTGTTGGGTTCATATCAAAGGAGATGATTCAAACCCATTGTCCAGCACCAGCACCAGATATCCAGATACTTAGGTGTGGTCCACCACCCATGACTAAAGCCATGGCTACTCACCTTAATGCACTTGGGTACTCACCATACATGCAGTTCGAGTTCTAA 897 0.4415 MLELPFKMTLRFPILDFKSLPFAQNLESELLGGAVALVAVGLTAAYIYYHRMKNPEGCLDPKNFKEFKLVKKTQLSHNVARFKFALPTPTSKLGLPVGKNILARGRDSQGEEVLRSYTPITLDSDLGYFELVVKMYPNGKMSHHFRQMKEGDYLAVKGPKGRFSYKPGQVMAFGMLAGGSGITPMFQLIRAILENPKDKTKLYLIYANVTVDDILLKEELDSFANSYPHRFRVFHVLNKPPEQWNGGVGFISKEMIQTHCPAPAPDIQILRCGPPPMTKAMATHLNALGYSPYMQFEF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02406 298 FunFam NADH-cytochrome b5 reductase 156 298 - -
Rops3g02406 298 Pfam Oxidoreductase FAD-binding domain 67 165 IPR008333 -
Rops3g02406 298 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 62 166 IPR017927 GO:0016491
Rops3g02406 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 174 193 IPR001709 GO:0016491
Rops3g02406 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 268 276 IPR001709 GO:0016491
Rops3g02406 298 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 223 IPR001709 GO:0016491
Rops3g02406 298 CDD cyt_b5_reduct_like 67 298 - -
Rops3g02406 298 FunFam NADH-cytochrome b5 reductase 57 156 - -
Rops3g02406 298 SUPERFAMILY Riboflavin synthase domain-like 57 167 IPR017938 -
Rops3g02406 298 Pfam Oxidoreductase NAD-binding domain 175 281 IPR001433 GO:0016491
Rops3g02406 298 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 154 292 IPR039261 -
Rops3g02406 298 Gene3D - 156 298 IPR039261 -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 93 104 - -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 268 276 - -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 151 165 - -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 212 223 - -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 174 193 - -
Rops3g02406 298 PRINTS Cytochrome B5 reductase signature 115 122 - -
Rops3g02406 298 Gene3D Translation factors 57 155 - -
Rops3g02406 298 PANTHER NADH-CYTOCHROME B5 REDUCTASE 54 298 IPR001834 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02406 Rops-Chr3 49139231 49143997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02406 58 298 NADPH P450 reductases AT5G17770 74.689 3.32e-140 395