Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02315 ATGCTCTGCGTTTTCTGCGAATCAAATGACAGCGTTTTCAGTCAATCTTGCTACTTCAAAAGGATCATGATGATGGAGGAAAGTTCGTGTGATTTCATTGCTGCTGCTGAAGATATGGTGGTCTCTTTCTTCTCTCTCACCGATTTTTCACACAGTCACTGCACAAATTCTTTCTCTCTATCACACACACAACACGCGCCTATTTCTGTGAGATACGTGAATCACTTCCCAACGCGCCGCTACGTACGACCCTTTTGGGATCCTGAGAGTTCGTACTTGAAGAGGCAGGAACAGAAGGACGTCCACGTCGACGAGGGCATAAGCAAAAAGAGCCCATGTTTGGACCAACATGTGCTGCTGTTTCCACCCACATCTGAATCAATCTCAATCTTAGGGGCTTCTGAGCACTTTAAAGTGGGTCGATTTCATGAAATTGATCACTCCGAACTTTCACCCAATTCCCCTGTTCAACTAGAATCTATCCGCATTGTAATGGTCAGTGACAAAGGGGAGCACCAGGTATCACTGAGGTACCCAAGTCTTCAATCTCTTCGCACGCACTTTAGTGACCCAAACTTTGGGAAGCCAGGTGGGAAGAAGATCCCTGCACTCGATGAAAAGTACGTGATGGGGTTGGAAATCGCCATTAAAGCACTTTACAGGAGCATCCCAACTGAGGAATTTACACAGAAAAGAAACTCATGGAGCTTCTGGGTCTCTCCATCTGAAGAAAACATTCAAAACTATGACAACCCAGTTACCACTGATGCTGCAACCAGCCTTGGTTCCAAGCAGGGTTCATGCTGGTCTCAGCTCAAGTTCACAGGGATGCAGTGGGGCAAACGCAGGCAAGTTCGGTTCCTGGGCCGTCATGAGGAGCAAAAGGTTGAATCTTTACCGGAATTTCACAAGGAAAAAGGGGTCAGTGTTGAACACAGAGAAGGGACAAATGAGAAGAGAAAGCAAGTTGAAGCAGAAATGGAGGCTGCCAAGGCAGGGTCTTATGGGGTAATGAGGATGACTCGTCAATATAACAAAAATGTTCAAAATGTGAGCAGCAGCAGCGGGGTCCAAAAGTCTAAGAAAGCAAAGAATGACACCAAGAAGCAGCAGCTCGTGATTTATGGCAAAAACAAGCGAAAAATCTCAATTGACAGATGGTCTGCTGAGAGGTATAAGCTAGCAGAGGAGAACATGTTGAGGGTTATGAAAGCAAAAGGAGCTGTGTATGGAAACCCAATATTGAGGCCAGAGTTGAGATCAGAAGCTCGAAAGTACATAGGTGACACAGGTTTACTAGATCATTTGCTGAAGCACATGGCTGGGAAAGTGGCACCTGGAGAAATTGAGAGATTCAGACGGCGACACAATGCAGAGGGTGCAATGGAATACTGGTTAGAAAGTGCTGATCTTGCTGATATTAGAAGGCAAGCAGGGGTCCAAGACCCTTACTGGACTCCTCCCCCTGGATGGAAGCTTGGGGACAGCCTTTCACAAGATCATGTTACCAGTAGAGAAATCAGAGAGATCAAGGAAGAAATACTTAAGTTGAAACAAGAAATGCAGGAGCTTGCATCAAAGAAGGGAGAGGAAGCAATGGCCATTGTGTCTACTCCTAGTTCCTGTTTGTCGAATATGAATTGGGAGGATTATGCTTCCTTGGTTCCAAAGCAGGAGATTTATGCGGAGTTGGTGAATAAGAAGGCTAAAATTGAGGAACAACTGAAGGAGATTTCACTGACTTTGAGTGGCATGGAGGAGCAACTGGGAATGCTGAAACAAACAACAGTAGGAGAAGAACAGATAATGTCAGAATCAGTAACGCCACAAGCGTTATTGGAAGGACCAACATCATTGGCAGAAAACATTGGAGGAGAGACAAGGAAGGAGAAGAAAGGTAATAAGAACAAACCAACAAAATCAGCAGATACACAAATGCAAGAAAGCAGAACAGCAGAGGACAAAGCAGCAAAGATAAAAAGGCTGAAAAGTGGTTTCCAAATTTGCAAACCACAAGGTACCTTTGTATGGCCAAACATGGGTGTGTCTCCCCAAACTGTCTCCAACCTTGATGAACTCACTGTGGTCCCGACCCCATCTTCAGCTTCCTCTTCTACCACCTCAGCTTCTAAACTCATCTCCAAAATCCAAACTCAAAACCTGCCATTGCCAACACCTAACCCTTCTTCCCCTGTTAAGCCACTAGCAGAAAGGCGCCCTGTGAGCTCTGCCACTTTGACCCATGTCACTGGGCCCTTTTCACCTCATCTTTCTCCACCATCAGGGACACCAAGATCCAGAACCACCACCACCAACATTAAGAACACGTCTTCTATTAACCTCAATGAGGCTCCTCTGACCCTAGAGTAA 2370 0.457 MLCVFCESNDSVFSQSCYFKRIMMMEESSCDFIAAAEDMVVSFFSLTDFSHSHCTNSFSLSHTQHAPISVRYVNHFPTRRYVRPFWDPESSYLKRQEQKDVHVDEGISKKSPCLDQHVLLFPPTSESISILGASEHFKVGRFHEIDHSELSPNSPVQLESIRIVMVSDKGEHQVSLRYPSLQSLRTHFSDPNFGKPGGKKIPALDEKYVMGLEIAIKALYRSIPTEEFTQKRNSWSFWVSPSEENIQNYDNPVTTDAATSLGSKQGSCWSQLKFTGMQWGKRRQVRFLGRHEEQKVESLPEFHKEKGVSVEHREGTNEKRKQVEAEMEAAKAGSYGVMRMTRQYNKNVQNVSSSSGVQKSKKAKNDTKKQQLVIYGKNKRKISIDRWSAERYKLAEENMLRVMKAKGAVYGNPILRPELRSEARKYIGDTGLLDHLLKHMAGKVAPGEIERFRRRHNAEGAMEYWLESADLADIRRQAGVQDPYWTPPPGWKLGDSLSQDHVTSREIREIKEEILKLKQEMQELASKKGEEAMAIVSTPSSCLSNMNWEDYASLVPKQEIYAELVNKKAKIEEQLKEISLTLSGMEEQLGMLKQTTVGEEQIMSESVTPQALLEGPTSLAENIGGETRKEKKGNKNKPTKSADTQMQESRTAEDKAAKIKRLKSGFQICKPQGTFVWPNMGVSPQTVSNLDELTVVPTPSSASSSTTSASKLISKIQTQNLPLPTPNPSSPVKPLAERRPVSSATLTHVTGPFSPHLSPPSGTPRSRTTTTNIKNTSSINLNEAPLTLE* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02315 789 PANTHER PROTEIN DYAD 134 784 IPR044221 GO:0007131|GO:0051177|GO:0051321
Rops3g02315 789 MobiDBLite consensus disorder prediction 743 789 - -
Rops3g02315 789 Coils Coil 507 527 - -
Rops3g02315 789 MobiDBLite consensus disorder prediction 611 656 - -
Rops3g02315 789 MobiDBLite consensus disorder prediction 624 638 - -
Rops3g02315 789 MobiDBLite consensus disorder prediction 348 368 - -
Rops3g02315 789 Coils Coil 313 333 - -
Rops3g02315 789 Coils Coil 557 588 - -
Rops3g02315 789 MobiDBLite consensus disorder prediction 717 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02315 Rops-Chr3 46660899 46665228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02315 375 467 PHD Transcription Factor Family AT5G22260 38.384 1.96e-06 49.7