Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02314 ATGTTCTACCACAACACAAAAGCCCTGGCACCCTTCCTGTTGTTAGCGTCAATGATAGTTGGAAGTGCAATGGCAGATTCATCCAAGGACAAAGAGGAATGCACAGAGCAATTGACACTGCTAGGAACATGCCTGCCTTATGTTGAAGGTGAAGCAAAAACTCCAGCACCAGATTGTTGTAGTGGTCTCAAGCAATTGCTGAAGAACAACAAGAAGTGTTTGTGTCTCATTATCAAAAATCGTAATGATCCAGATTTGGGTATACAGATTAATGTGACTTCAGCTTTGAGCATGCCAACTGTTTGCAATGCCCCTGCCAATATCTCCAAGTGCCCAGAGCTGCTGCATATGGATCCCAAATCACCAGAGGCTCAAATTTTTTATCAATCAAACAAAGGATCCACCAGCAAAAGCGGCACAAGTTCTGCACCTAGTCCTTCTGATGGAGCAAGTCATGCAATCAACCAGACAACAAGTACCACACAAAAGAATGGTGCCTTCTGCAAGCAAAAGAGATTGTTTTGGTTAAACGTTTTGGCTGCAGAGATTCTAGTTTGGCCTTTATTTGGCTCTGCTGCTGGAAACATTTTTATTTGA 597 0.4288 MFYHNTKALAPFLLLASMIVGSAMADSSKDKEECTEQLTLLGTCLPYVEGEAKTPAPDCCSGLKQLLKNNKKCLCLIIKNRNDPDLGIQINVTSALSMPTVCNAPANISKCPELLHMDPKSPEAQIFYQSNKGSTSKSGTSSAPSPSDGASHAINQTTSTTQKNGAFCKQKRLFWLNVLAAEILVWPLFGSAAGNIFI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02314 198 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 112 IPR036312 -
Rops3g02314 198 SMART aai_6 34 111 IPR016140 -
Rops3g02314 198 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 19 149 IPR043325 -
Rops3g02314 198 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 111 - -
Rops3g02314 198 Pfam Probable lipid transfer 16 111 IPR016140 -
Rops3g02314 198 Gene3D - 31 111 IPR036312 -
Rops3g02314 198 CDD AAI_LTSS 41 103 - -
Rops3g02314 198 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02314 Rops-Chr3 46639539 46641007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02314 8 189 Acyl Lipid Metabolism Gene Families AT2G44290 47.668 1.31e-61 189