Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02313 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGCATTGGGGTACTTCTTAAGGCTTGTGGCTTTAGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCACGGGGAGGTGTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACCTCAAATTAACTCGTGACAATAATATCACAACTGGAAAAATATATCAGTCTGTTATAGAGAAAGAGAGAAGAGGAGATTATCTTGGCAAGACTGTCCAGGTTGTTCCACATATAACGGATGCCATCCAAGAGTGGATAGAGCGTGTAGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAATCCATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCGCTAGCAACTTCTGTTTGGTTCATGTCAGCCTGGTGCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCACAGTGTCCGACAACTTAGAGGGTTAGGGTTGATCCCAAATCTTCTTGCTTGTCGCTGTTCAAAGGAACTTGATGACAATGTTAAGGAAAAACTCTCTCAATTTTGTCATGTGCCGTCATCAAACATACTTACTCTCTGTGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAGAAGGCACATGAGGCAATCCTGAAAACATTAAACCTGCAAAGTGTTGCTACACAGCCTAATTTCTGGGAGTGGATCACTACAACAAAAGTTTATGACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACAGGCCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTGTTGCTCTCAACCGTAAGCTTATTGTGGACTGGGTTCCTGCTGGGGATCTTGAAGATGCTACTTTAAAAGAGGATCCTGATGCATATGAAGCTGCTTGGGGTCTTTTGAAGGGTGCTAGTGGGATTCTAGTTCCAGGAGGTTTTGGTGATAGGGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAAAATAGTGTTCCATTTCTAGGCGTTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTGCAAGATCTGTTCTGGGTCTTCTTGATTCTAATAGCACAGAATTTGATCCTGAAGCCAAAAATCCATGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCAAGGAGAACTTACTTCCGAGTTGCGGACTGCAAATCAGCCAAGTTGTATGGTAATGCAAGCTTTATTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTTGAGAGTGCTGGTCTATCTTTTGTTGGCAGAGATGAAACTGGGAGGCGCATGGAGATAGTTGAATTGCCTGGTCATCCTTTCTTTATTGGTGCTCAGTTTCACCCTGAGTTCAAGTCGAGACCGGGGAAACCTTCTCCACTATTCTCAGGATTGATAGCAGCAGCATGTGAGAGGACAGTTGCGCCAGGAAGCAAAGAATATGCAAAGTTAACCAATGGAATATTCAATGTACACTCTCCAATGCTTGAAGCTCATAACTTAAATGGGTTCAAATCTTCCAATGGTTCCCTAAATGGTGTACATACCAATGGCCATATGGATGGTAGTTCTTAA 1806 0.4269 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGASNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLIPNLLACRCSKELDDNVKEKLSQFCHVPSSNILTLCDVPNIWHIPLLLRDQKAHEAILKTLNLQSVATQPNFWEWITTTKVYDKFHESVRIAMVGKYTGLSDAYLSVLKALLHASVALNRKLIVDWVPAGDLEDATLKEDPDAYEAAWGLLKGASGILVPGGFGDRGVQGKILAAKYARENSVPFLGVCLGMQIAVIEFARSVLGLLDSNSTEFDPEAKNPCVIFMPEGSKTHMGGTMRLGSRRTYFRVADCKSAKLYGNASFIDERHRHRYEVNPDMISQLESAGLSFVGRDETGRRMEIVELPGHPFFIGAQFHPEFKSRPGKPSPLFSGLIAAACERTVAPGSKEYAKLTNGIFNVHSPMLEAHNLNGFKSSNGSLNGVHTNGHMDGSS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02313 601 Gene3D - 1 292 IPR027417 -
Rops3g02313 601 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Rops3g02313 601 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Rops3g02313 601 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Rops3g02313 601 FunFam CTP synthase 295 556 - -
Rops3g02313 601 PANTHER CTP SYNTHASE 1 550 IPR004468 GO:0003883|GO:0006221
Rops3g02313 601 FunFam CTP synthase 1 292 - -
Rops3g02313 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Rops3g02313 601 Gene3D - 294 556 IPR029062 -
Rops3g02313 601 NCBIfam CTP synthase (glutamine hydrolyzing) 1 545 IPR004468 GO:0003883|GO:0006221
Rops3g02313 601 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Rops3g02313 601 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Rops3g02313 601 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Rops3g02313 601 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02313 Rops-Chr3 46571568 46586138 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02313 3 46571568 46586138 Rops3g02313 3 46571568 46586138 ECH
Rops7g01933 7 32003699 32008210 Rops3g02313 3 46571568 46586138 PCT