Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02306 ATGTGCAGCACCAAGGCCAAAGTGACTGTAGGCATAGAAGCCACAGCCACAGCCACATTTCCTGTGGCTAGAATCAATGGCAGGCCTGTCCTTCAACCAACTTGTAATAGAGTTCCTAACCTTGAGAGGAGAAATTCAATCAAGAAAGTGCCACCAAAGTCACTTTCTCCACCATCACCACCACTCCCAAGTAAGACCTCATTGACACCTCCAGTTTCTCCAAAGTTAAAGTCCCCAAGGCCTCCAGCAATAAAGAGAGGCAATGACAGTACTGGGCTGAATTCAAGTTCTGAAAAGATTTTAATCCCAACAAACTCCACAAAATCTAGAACTCTAGAGAGGAAAAAGTCCAAGAGTTTTAAGGATGTTTCCTTTGGTACTAGCCCTTCTGCTTCAATTGAGGCGTCATTAAGTTACTCTTCCACTTTGATCACTGATGCCCCAGGGAGCATAGCTGCTGTGAGGAGAGAACAGATAGCACTGCAGCATGCACAGAGAAAAATGAAGATAGCCCATTATGGAAGATCAAAATCTGCAAACTTTGAAAGAGTTGTTCCTCTCGATCCTTCAAGTAATCCTATATCAAAGACAAGTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTCTAGTTTTAAGTGGTGCTCAAGTTGGATCTGATTGGACCTCAATCTTGAAGAAACGCCAAGATTTCAGGACTGCATTTTCAGAATTTGATGTAGCAACTTTGGCCAACTTCACTGATAAGCAAATGATGTCTATTAGTTTGGAATATGGCATTGATATAAGCAGAGTTCGAGGAGTTGTTGATAATGCTAATCGAATTTTGGAGATTATCAAGGACTTTGGTTCATTTGACAAATATATTTGGGGTTTTGTGAATCATAAACCCATCTTCACTCAATACAAGTTTGGCCACAAGATCCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGGTTAGAAGGGGCTTCAGGTTCGTAGGCCCAACAGTGGTTCATTCATTTATGCAAGCAGCTGGCCTCACCAATGATCACTTAATCAATTGCCACAGGCACTTACAATGCACCTTATTGGCATCTCAACCCCATTGTACCATATAA 1191 0.4165 MCSTKAKVTVGIEATATATFPVARINGRPVLQPTCNRVPNLERRNSIKKVPPKSLSPPSPPLPSKTSLTPPVSPKLKSPRPPAIKRGNDSTGLNSSSEKILIPTNSTKSRTLERKKSKSFKDVSFGTSPSASIEASLSYSSTLITDAPGSIAAVRREQIALQHAQRKMKIAHYGRSKSANFERVVPLDPSSNPISKTSEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTAFSEFDVATLANFTDKQMMSISLEYGIDISRVRGVVDNANRILEIIKDFGSFDKYIWGFVNHKPIFTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLINCHRHLQCTLLASQPHCTI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02306 396 Gene3D Hypothetical protein; domain 2 201 383 - -
Rops3g02306 396 Pfam Methyladenine glycosylase 209 382 IPR005019 GO:0006284|GO:0008725
Rops3g02306 396 PANTHER OS04G0501200 PROTEIN 23 391 - -
Rops3g02306 396 MobiDBLite consensus disorder prediction 53 78 - -
Rops3g02306 396 SUPERFAMILY DNA-glycosylase 202 385 IPR011257 GO:0003824|GO:0006281
Rops3g02306 396 MobiDBLite consensus disorder prediction 30 129 - -
Rops3g02306 396 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02306 Rops-Chr3 46378856 46381962 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02306 3 46378856 46381962 Rops3g02306 3 46378856 46381962 ECH
Rops7g01831 7 29173959 29176696 Rops3g02306 3 46378856 46381962 PCT