Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02262 ATGGAGTTGTCAATGGAGAACCATTCGGGGAATAGGAAGAGGAGAGCAGAGAACCCCCATCCAGGTAGGATTGTTCAGCCCCATATGAGAATTGCTTTTGAGAGTCATGGAGTATGGCCAGTTGGACCCCACACCTTAAGTTGTAACAGATGTGGGAGGATCCATAGTGGTCCTTGTCAGGCTAGGCAAGAAGTGTGTTTTTGTTGTGGTAAATCGAGACACATGGCTCGCATTTGTCCACCAATGAAAGAAAAAGAAAGAGAGGAGAGAGAAAGTGAGAAAGGGTCACCGGCCGCCCCCGCCAAACGAAACCTCCTTCGTCCTTCCTTTCTTTATTCAAAGTCAATTCACAGCGCCACCTGCTCAACCGATTTTGGAAAAAGGTTCAAGTTTTGGAATTGGATTCGTGCTTTAGTTATGGCTACGTCGAGCGCTGGATCCAACGATTCCACTGCTAATAGAAGACAAACCAAACGACCCAAGTACTCGAGGTTTACACAACAGGAACTTCCAGCATGCAAACCTATTCTTACACCACGAGCGGTTATTTCAGCATTCATGATTGTCACCGTTGTATTCATTCCTATTGGAGTTGCTTCGTTGATTGCTTCACGAGATGTTGTTGAAATTGTTGATAGGTATGAGGCAGCGTGTGTACCATCAAATTGGACAGACAAGGTAGCATACATTCAGAATCGGGCGACAGATAAAACATGCAAGAGGGAGCTACATGTGGAGAAGCGTATGAAGGCTCCTATCTATGTTTACTATCAGCTTGACAACTTTTACCAGAATCATCGCCGGTATGTCAAAAGCCGAAATGATGAGCAGTTGAAGGATGCCGGAAAAGCAAACTCAACAAGTGGTTGTAAGCCTGAAGATTATGTAAATGGAACTGCAATTTTACCTTGTGGTCTTATAGCTTGGAGCTTGTTCAACGATACATACAGCTTCTCCCGCAGCAACAATAATTTGACAGTGAACAAGAAAGGCATCTCATGGAAGAGTGATAGGGAGCACAAATTTGGAAGTGATGTTTTCCCTAAAAATTTCCAGAATGGTTCCATTATAGGTGGTGCTTCTCTGGATGAAAAAATACCATTGAGTGAGCAAGAGGATCTTATTGTTTGGATGCGAACTGCTGCTTTGCCAACTTTTAGGAAGTTGTATGGAAAGATTGAGGTGGATCTGGAGAAAGGTGATGTCATAGACGTGACATTGCAAAATAACTACAACACTTACAGTTTTAGTGGCAAGAAGAAGCTTGTACTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGAGTTCCTTGGCATTGCTTATCTCACTGTTGGAGGATTGAGCTTCTTTTTGGCTATTGCTTTCACCGCTGTATATTTTGTCAAGCCAAGGCAACTTGGAGATCCCTCATATTTGTCATGGAATAGGAACCCAGCAGGACAATGA 1446 0.4357 MELSMENHSGNRKRRAENPHPGRIVQPHMRIAFESHGVWPVGPHTLSCNRCGRIHSGPCQARQEVCFCCGKSRHMARICPPMKEKEREERESEKGSPAAPAKRNLLRPSFLYSKSIHSATCSTDFGKRFKFWNWIRALVMATSSAGSNDSTANRRQTKRPKYSRFTQQELPACKPILTPRAVISAFMIVTVVFIPIGVASLIASRDVVEIVDRYEAACVPSNWTDKVAYIQNRATDKTCKRELHVEKRMKAPIYVYYQLDNFYQNHRRYVKSRNDEQLKDAGKANSTSGCKPEDYVNGTAILPCGLIAWSLFNDTYSFSRSNNNLTVNKKGISWKSDREHKFGSDVFPKNFQNGSIIGGASLDEKIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDLEKGDVIDVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNEFLGIAYLTVGGLSFFLAIAFTAVYFVKPRQLGDPSYLSWNRNPAGQ* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02262 481 MobiDBLite consensus disorder prediction 1 21 - -
Rops3g02262 481 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 201 465 IPR005045 GO:0016020
Rops3g02262 481 ProSiteProfiles Zinc finger CCHC-type profile. 66 80 IPR001878 GO:0003676|GO:0008270
Rops3g02262 481 MobiDBLite consensus disorder prediction 80 97 - -
Rops3g02262 481 MobiDBLite consensus disorder prediction 80 101 - -
Rops3g02262 481 PANTHER CELL CYCLE CONTROL PROTEIN 50 154 474 IPR005045 GO:0016020
Rops3g02262 481 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02262 Rops-Chr3 44954996 44970099 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02262 3 44954996 44970099 Rops3g02262 3 44954996 44970099 ECH
Rops7g01803 7 28570133 28575491 Rops3g02262 3 44954996 44970099 PCT