Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02189 ATGATGGTTTGGTGTAAAGTAGAGAAATTGGTTGTGTTCATATACTTGTGGTTGTGGTGGAGTAGTACTAGTATTCATGTTAAAGCCGAAGATCACAGTTTGAGGCCAGGTGATACCCTGAATTCAACATCCAAGCTATGTTCTAAAAATGGAAAATATTGTATGGAATTTGGCCGAACATACGGTGATGAGGACGATTACTTGCTTATTGAAGATACATATGGGAATGTAGTGTGGTTTAGTGATAGAAATCAACCAGTTGACCGTGATTCTGCAGTTCTATCGCTAAACCACTCTGGTGTGCTGAAAATAGAATCTCAACGTGGGAAAACATCAATAATCCTTTACTCTCCACCTCATGCCAGTGTCATCAACAACAATACTGTGGCAACCTTGTTGGACTCTGGCAATTTTGTGCTTCAACAACTTCACCCCAACGGGACAAAGAGTGTTGTGTTGTGGCAGAGTTTTGATTATCCCACAGACACTTTAATCCCTACGATGAAGTTAGGTGTTAACCACAAAACAGGACATAATTGGTCACTGGTTTCGTCCTTGACTGATTCACTCTCAACTCCTGGTGCCTTTAGCCTTGAATGGGAACCAAAATCACGCCAATTGATCATCAGGCGACGTGGAAAAGTGTGCTGGAGAAGTGGGAAACTTATAAACAATAGATTCGAACACATTCCAGAGAAAATCCAGCGTATGTATCAGTACACCATTGTCTCAAACAGGGATGAGGATTCCTTCACTTTCAATTTCAAAACTCCGAATAACGTTGGGTTTCCAGCATGGTCATTATTAGAAACAGGGCAGTTAGCCAGTGCTCTAGGAGACATTGCAAGGGCTGATATGTGTTACGGATATAATAATACTGAAGGAGGGTGCCAAAGATGGGAGGATATACCCACTTGTAGGAAACCCGGTGATGTGTTTGAGAGTAGGGTACGTAACCCCAATTATGAAAATGCAACCACTGAACCGAATACAGGTTATGGCAGCAGTGATTGCTTGGCCATTTGCTGGAGCAACTGTAACTGCACCGGATTCAAAGCATTTTATCGTAATGGAACTGGATGTATATTCTTTCAATGTCCACTGGAAGATTATGTTAAAGAACCTAGTGGAGAAAAACTTTACATGCTGGTAAACATGGTCCCGCATAAGCGTACAAAAAAGTGGATATGGATAAGTGCAGTCATAGCAGCTGCTCTGCTCATAATATGCGCATTCATTTTATGCCTTGCCTTAAAGAAACGAAAATATGGGTTTAAAGGGAAGAAAAGTAAAAGCATGGAGACGGAGCTGCAAGATTTGGATGCTACCGATGGATCTTCTGGGATCAAAGATTTTGAAGATGATTTAAAGAAGGGTCATGATATCGAAGTATTTAACTATACATCAGTTTTGACAATGACTAGCAACTTTTCACCTGAAAACAAGCTAGGACAGGGAGGCTTTGGACCTGTTTATAAGGGAATCCTGCCAACTGGGCAAGAAGTTGCTGTGAAAAGATTGTCAAAAAATTCTGGGCAAGGAATTGTGGAATTTAGAAATGAGCTAACACTCATATGTGAACTTCAACACACGAATCTTGTACAACTACTTGGTTGTTGCATCCATAAAGAAGAGAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATTGTACAAGAAGCAAGTTCCTAGATTGGAAGAAGCGCTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAGGCTAGCAACATACTTCTTGATAAGAATATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGAATATTTACACTTGAATCCACAATAAATACCAACAGGATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCCATGGAAGGTATTTGCTCCACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTAGTGGAAGAAGAAACAACAGCTTCTATGATGCTGACCGCCCACTGAACCTAATAGGACATGCATGGGAGCTATGGAATGAGGATTTGTGGCAACAATTAATGGATCTGTCATTAAATGACACATTTGTCCCTGATGAAGTGCAAAGATGCATTCATGTTGGTCTCTTATGTGTGCAACAAGATGCAAATGATCGACCTACAATGTCTGAGGTTATTTCAATGTTAACCAACAAAATTACAATTGATACCTTGCCAAGAAGACCAGCATTCTATGTTGGAAGAGAGATCCTTGAGGGGACATCATCTTCTAAACATAGTTTGGCGAGTAGTGCACTGACTTGGTTTTTGCATCTTGATAAAAACCAAACAAGGAGTTGGCATGAATTAGCAGAGCTGTTTGTAAAGTAG 2424 0.3981 MMVWCKVEKLVVFIYLWLWWSSTSIHVKAEDHSLRPGDTLNSTSKLCSKNGKYCMEFGRTYGDEDDYLLIEDTYGNVVWFSDRNQPVDRDSAVLSLNHSGVLKIESQRGKTSIILYSPPHASVINNNTVATLLDSGNFVLQQLHPNGTKSVVLWQSFDYPTDTLIPTMKLGVNHKTGHNWSLVSSLTDSLSTPGAFSLEWEPKSRQLIIRRRGKVCWRSGKLINNRFEHIPEKIQRMYQYTIVSNRDEDSFTFNFKTPNNVGFPAWSLLETGQLASALGDIARADMCYGYNNTEGGCQRWEDIPTCRKPGDVFESRVRNPNYENATTEPNTGYGSSDCLAICWSNCNCTGFKAFYRNGTGCIFFQCPLEDYVKEPSGEKLYMLVNMVPHKRTKKWIWISAVIAAALLIICAFILCLALKKRKYGFKGKKSKSMETELQDLDATDGSSGIKDFEDDLKKGHDIEVFNYTSVLTMTSNFSPENKLGQGGFGPVYKGILPTGQEVAVKRLSKNSGQGIVEFRNELTLICELQHTNLVQLLGCCIHKEERILIYEYMPNKSLDFYLFDCTRSKFLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDKNMNPKISDFGMARIFTLESTINTNRIVGTYGYMSPEYAMEGICSTKSDVYSFGVLLLEIVSGRRNNSFYDADRPLNLIGHAWELWNEDLWQQLMDLSLNDTFVPDEVQRCIHVGLLCVQQDANDRPTMSEVISMLTNKITIDTLPRRPAFYVGREILEGTSSSKHSLASSALTWFLHLDKNQTRSWHELAELFVK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02189 807 PIRSF SRK 4 278 IPR024171 GO:0004674
Rops3g02189 807 PIRSF SRK 279 799 IPR024171 GO:0004674
Rops3g02189 807 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Rops3g02189 807 Pfam PAN-like domain 308 365 IPR003609 -
Rops3g02189 807 Gene3D Transferase(Phosphotransferase) domain 1 553 755 - -
Rops3g02189 807 Pfam Protein tyrosine and serine/threonine kinase 480 747 IPR001245 GO:0004672|GO:0006468
Rops3g02189 807 ProSiteProfiles Protein kinase domain profile. 477 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02189 807 SUPERFAMILY Protein kinase-like (PK-like) 462 775 IPR011009 -
Rops3g02189 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 139 774 - -
Rops3g02189 807 Gene3D - 25 157 IPR036426 -
Rops3g02189 807 SMART blect_4 31 160 IPR001480 -
Rops3g02189 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 553 755 - -
Rops3g02189 807 CDD STKc_IRAK 483 749 - -
Rops3g02189 807 Pfam D-mannose binding lectin 77 184 IPR001480 -
Rops3g02189 807 Gene3D Phosphorylase Kinase; domain 1 446 552 - -
Rops3g02189 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 443 552 - -
Rops3g02189 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Rops3g02189 807 SMART serkin_6 477 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02189 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02189 Rops-Chr3 42767525 42776556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02189 387 784 Receptor kinase-like Gene Family AT4G05200 46.078 3.19e-117 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02189 PK_Tyr_Ser-Thr 7.3e-48 CL0016