Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02151 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCACCATGTGCAGCATGCAAGCTCCTTAGAAGGAGATGTGCACAGGACTGTGTGTTTGCTCCGTATTTTCCTGCAGATGAACCCCAGAAGTTTGCTAGTGTTCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAATTACCAGAGCACCAAAGACGTGATGCAGTTAGCTCAATGGTATATGAAGCCAATGCAAGGGTGAGAGACCCTGTGTATGGATGTGTAGGAGCCATATCATCTTTGCAACAACAAGTTGATGTGTTACAAACCCAATTGGCACGTGCACAAGCAGAGGTTGTGCAATTGAGAATGCGCCAAGTGTCAACTTCATTTGATCAGAACAAACCAGTGCCTGCAACCTCCAATTCATCATCAGAGAACTTATCTCCATCAAGCAGGCTCATGTCTTCACAGAACAACTCTCTTTTAGCCATGGACATGGTTGTTGATCAAGCAAACAGGGGAGAATCATTGTGGTCATGCTAG 528 0.4489 MKEGGRKQGAMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRRDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLARAQAEVVQLRMRQVSTSFDQNKPVPATSNSSSENLSPSSRLMSSQNNSLLAMDMVVDQANRGESLWSC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02151 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 148 - -
Rops3g02151 175 MobiDBLite consensus disorder prediction 125 150 - -
Rops3g02151 175 Coils Coil 92 119 - -
Rops3g02151 175 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Rops3g02151 175 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02151 Rops-Chr3 41571417 41576990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02151 1 175 AS2 family AT1G31320 73.295 9.89e-76 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Rops3g02151 LOB 9.8e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g02151 3 41571417 41576990 Rops3g02151 3 41571417 41576990 ECH